- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S30.g00830.02.t
Possible name(s)
TUBB2A; TUBB2B; TUBB4B
Gene model
Location
S30 [51,382 / 54,576]
Amino acid sequence
Length: 444
>Haaura.CG.MTP2014.S30.g00830.02.p
MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDIQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVMDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLVSKMREEYPDRMMITFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVACLFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEEDED
Nucleotide sequence
Length: 1,332
>Haaura.CG.MTP2014.S30.g00830.02.t
ATGCGCGAAATAGTTCATTTACAAGCGGGCCAATGTGGAAATCAAATTGGTTCAAAGTTT
TGGGAAGTCATATCTGATGAGCATGGAATTGATCCCACCGGTACATATCACGGAGACAGC
GATATACAACTCGAAAGAATCAACGTCTACTACAACGAAGCATCGGGAGGAAAATATGTT
CCACGTGCCGTTCTCGTCGATCTCGAGCCAGGAACAATGGATTCCGTAAGATCCGGACCT
TTTGGGCAACTTTTCCGCCCGGATAACTTTGTGTTTGGACAAAGTGGCGCTGGTAATAAC
TGGGCGAAAGGCCATTACACAGAAGGAGCCGAATTGGTCGATTCCGTTATGGACGTTGTT
AGAAAAGAAGCTGAGGGATGCGACTGCCTTCAGGGGTTTCAACTCACACATTCATTAGGA
GGTGGCACAGGATCTGGTATGGGAACGCTCCTCGTCAGTAAAATGCGTGAAGAATATCCG
GACAGAATGATGATCACTTTTAGCGTCGTGCCCTCTCCTAAAGTTTCCGATACGGTTGTC
GAGCCTTACAATGCGACGCTCTCCGTCCATCAATTGGTAGAAAATACCGACGAAACGTAC
TGTATCGACAACGAAGCGTTGTACGATATCTGCTTCCGTACACTGAAGCTTACGACGCCA
ACATATGGAGATTTGAACCATCTCGTTTCAGCTACGATGAGTGGCGTAACGACATGTCTC
CGTTTCCCAGGACAACTGAATGCCGATCTTCGTAAACTCGCTGTAAACATGGTCCCCTTC
CCCCGTCTTCACTTCTTCATACCCGGATTTGCTCCCCTTACCAGCAGAGGTAGTCAGCAA
TACCGAGCCTTGACCGTTCCTGAACTGACCCAACAGATGTTCGATTCTAAAAACATGATG
GCTGCCTGTGATCCTCGTCATGGAAGATATCTCACAGTCGCATGTTTGTTCCGTGGTCGT
ATGTCGATGAAGGAAGTTGATGAGCAAATGCTGAACGTACAAAACAAAAACAGCTCGTAC
TTTGTCGAATGGATTCCAAACAATGTGAAGACAGCAGTGTGTGATATCCCACCCCGTGGT
TTGAAAATGTCGTCAACTTTCATTGGGAACAGTACAGCTATTCAGGAGCTGTTCAAGCGC
ATTTCGGAGCAGTTCACTGCTATGTTCCGTCGTAAAGCGTTTTTGCATTGGTATACTGGA
GAGGGTATGGATGAGATGGAATTCACAGAAGCTGAAAGCAATATGAACGACTTGGTCAGT
GAATACCAGCAGTACCAGGATGCAACTGCCGAAGAGGAAGGAGAGTTTGACGAGGAGGAA
GAAGACGAGGAT
| ProSitePatterns |
Beta-tubulin_BS (IPR013838) - T[1-4] . |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 5.3E-129 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 2.35E-103 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 2.0E-69 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 2.9E-105 - T[51-70] 2.9E-105 - T[93-104] 2.9E-105 - T[106-130] 2.9E-105 - T[132-150] 2.9E-105 - T[151-172] 2.9E-105 - T[176-189] 2.9E-105 - T[190-210] 2.9E-105 - T[370-398] 2.9E-105 |
| PANTHER |
Beta_tubulin (IPR002453) - T[12-443] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[12-443] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[41-58] 8.7E-122 - T[88-99] 8.7E-122 - T[108-126] 8.7E-122 - T[152-164] 8.7E-122 - T[212-224] 8.7E-122 - T[230-239] 8.7E-122 - T[245-258] 8.7E-122 - T[265-281] 8.7E-122 - T[311-329] 8.7E-122 - T[329-343] 8.7E-122 - T[347-370] 8.7E-122 - T[377-388] 8.7E-122 - T[412-430] 8.7E-122 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 1.6E-71 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[140-146] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[244-429] 8.55E-84 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 1.2E-48 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 5.5E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 2.0E-56 |
| Gene3D |
Tubulin_C (IPR023123) - T[374-444] 2.6E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 96.487 % | 850 | 0 |
| TBB2B_HUMAN | 95.349 % | 850 | 0 |
| TBB2A_HUMAN | 95.116 % | 847 | 0 |