- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S30.g00831.01.t
Possible name(s)
TUBB; TUBB2B; TUBB4B
Gene model
Location
S30 [51,382 / 59,505]
Amino acid sequence
Length: 397
>Haaura.CG.MTP2014.S30.g00831.01.p
MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGTYHGDSDIQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVMDVI
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLVSKIKEEYPDRMMNTFSVVPSPKVSDTVV
EPYNATLSAHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTSQMFDSKNMM
AACDPRHGRYLTVACLFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHW
Nucleotide sequence
Length: 1,191
>Haaura.CG.MTP2014.S30.g00831.01.t
ATGCGCGAAATAGTTCATTTACAAGCGGGCCAATGTGGAAATCAAATTGGTTCAAAGTTT
TGGGAAGTCATATCTGATGAGCATGGAATTGATCCCACCGGTACATATCACGGAGACAGC
GATATACAACTCGAAAGAATCAACGTCTACTACAACGAAGCATCGGGAGGAAAATATGTT
CCACGTGCCGTTCTCGTCGATCTCGAGCCAGGAACAATGGATTCCGTAAGATCCGGACCT
TTTGGGCAACTTTTCCGCCCGGATAACTTTGTGTTTGGACAAAGTGGCGCCGGTAATAAC
TGGGCGAAAGGCCATTACACGGAAGGAGCCGAATTAGTCGACTCCGTTATGGACGTCATT
AGAAAAGAAGCGGAGGGATGCGACTGCCTCCAGGGGTTTCAACTCACACATTCATTGGGA
GGAGGCACAGGATCTGGTATGGGAACTCTGCTTGTCAGTAAAATCAAAGAGGAATATCCC
GACAGAATGATGAACACCTTTAGCGTCGTGCCCTCTCCCAAGGTATCCGATACCGTGGTA
GAACCTTACAACGCAACACTTTCGGCCCATCAGTTGGTAGAAAATACCGACGAAACCTAC
TGTATCGACAACGAAGCACTATACGATATCTGCTTCCGTACTCTGAAGCTTACGACGCCG
ACGTATGGAGATCTGAACCATCTCGTTTCAGCTACTATGAGTGGCGTAACGACATGTCTC
CGTTTCCCAGGACAACTGAATGCCGATCTTCGTAAACTCGCTGTAAACATGGTCCCCTTC
CCCCGTCTTCACTTCTTCATACCCGGATTTGCTCCCCTTACCAGCAGAGGTAGTCAGCAA
TACCGAGCCTTGACTGTTCCTGAACTGACCTCACAGATGTTCGATTCTAAAAACATGATG
GCTGCCTGTGATCCTCGTCATGGAAGATATCTCACAGTCGCATGTTTGTTCCGTGGTCGT
ATGTCGATGAAGGAAGTTGATGAGCAAATGCTGAACGTACAAAACAAAAATAGCTCGTAC
TTTGTCGAATGGATTCCAAACAATGTGAAGACAGCAGTGTGTGATATCCCACCCCGTGGT
TTGAAAATGTCGTCAACTTTCATTGGGAACAGTACAGCTATTCAGGAGCTGTTCAAGCGC
ATTTCGGAGCAGTTCACTGCTATGTTCCGTCGTAAAGCGTTTTTGCATTGG
| ProSitePatterns |
Beta-tubulin_BS (IPR013838) - T[1-4] . |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-243] 2.62E-103 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-263] 3.2E-128 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-211] 5.5E-70 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 5.9E-105 - T[51-70] 5.9E-105 - T[93-104] 5.9E-105 - T[106-130] 5.9E-105 - T[132-150] 5.9E-105 - T[151-172] 5.9E-105 - T[176-189] 5.9E-105 - T[190-210] 5.9E-105 - T[370-397] 5.9E-105 |
| PANTHER |
Beta_tubulin (IPR002453) - T[12-397] 0.0 |
| PANTHER |
Tubulin (IPR000217) - T[12-397] 0.0 |
| PRINTS |
Beta_tubulin (IPR002453) - T[41-58] 1.9E-111 - T[88-99] 1.9E-111 - T[108-126] 1.9E-111 - T[152-164] 1.9E-111 - T[212-224] 1.9E-111 - T[230-239] 1.9E-111 - T[245-258] 1.9E-111 - T[265-281] 1.9E-111 - T[311-329] 1.9E-111 - T[329-343] 1.9E-111 - T[347-370] 1.9E-111 - T[377-388] 1.9E-111 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[47-244] 3.4E-71 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[140-146] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[244-397] 1.71E-67 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-383] 4.2E-48 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-381] 7.1E-42 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[264-373] 6.0E-56 |
| Gene3D |
Tubulin_C (IPR023123) - T[374-397] 2.4E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBB4B_HUMAN | 95.718 % | 786 | 0 |
| TBB2B_HUMAN | 94.458 % | 781 | 0 |
| TBB2A_HUMAN | 94.207 % | 779 | 0 |