- Transcript 'Cisavi.CG.ENS81.R0.2...' >
- Transcript 'Boleac.CG.SB_v3.S1.g...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S3270.g10181.01.t
Possible name(s)
ZNF112; ZNF300; ZNF570
Gene model
Location
S3270 [4,428 / 5,877]
Amino acid sequence
Length: 452
>Haaura.CG.MTP2014.S3270.g10181.01.p
MKTFFCRICHKPFSECLRYMRHVKMHRIGKYIRRSIASKKTSKCLHARLGYTLRSYLLKR
PFKCGICNRVVSERLSRINNSPVVSLRKKWNLKMKKKKSRVCVNEGVKSSKLTANVDKDI
GQTVNQKVDCSSQNKTSTTIVTIVSPLKSDKADDVDIKPLTTVTTFPNVSKYIKIYKCSL
CDKSFPHKSSVKTHMLIHSGEKPFRCVECDKSFKTKNQMNIHMRVHTKERPYSCEICDRE
FTQLGQAKRHLATHTGDKPFVCEVCEKTFARKFYLKKHMRTHTKEKPFKCMVCDRAFSQS
IHLKTHMKVHTGERPFECETCKKLFARKGDLTTHLRIHTKEKPHACTDCGKAFTDRSTLI
KHLRLHSGENGAGLKTCKCEVCHKPFSTLGALKTHMVLHTGERPFLCEACGKKFPRKGDL
RSHIKVHKNYIGKIVEIPADQEPFYVEIEISE
Nucleotide sequence
Length: 1,449
>Haaura.CG.MTP2014.S3270.g10181.01.t
TTACTTCATCGCAATCTTGCAACACGAGACAGTGAAGTTATTGTAAATGCTGCATGTTAT
TATTGTTATTATTAACTCGTTTTGGAAAGCAAAATGAAGACTTTCTTTTGTCGTATTTGC
CATAAACCATTTTCCGAATGTTTGCGTTACATGAGACATGTTAAAATGCATAGAATTGGG
AAATATATTCGACGGTCTATCGCAAGCAAGAAGACCTCGAAGTGCTTGCACGCTCGCTTG
GGCTATACGTTACGATCTTATTTGCTTAAAAGGCCTTTCAAATGCGGAATTTGCAACCGA
GTAGTTTCAGAGAGATTAAGCCGTATCAACAATTCGCCAGTTGTCAGTTTAAGAAAGAAA
TGGAATTTGAAAATGAAAAAGAAAAAATCCCGAGTTTGTGTGAATGAAGGAGTAAAATCT
TCAAAATTAACTGCTAACGTGGACAAGGATATTGGGCAAACAGTTAACCAGAAGGTAGAT
TGTTCTTCTCAAAATAAAACATCAACAACGATTGTAACGATAGTGAGTCCTCTCAAAAGT
GACAAAGCAGATGACGTTGATATTAAACCTCTTACTACGGTTACTACATTTCCCAATGTG
TCAAAATATATAAAAATATATAAATGTTCCTTGTGTGACAAAAGTTTCCCCCATAAGTCG
AGCGTCAAGACACATATGCTGATACATTCGGGAGAGAAACCTTTCCGATGCGTGGAATGT
GATAAATCATTCAAGACGAAGAATCAAATGAATATTCACATGAGGGTCCACACGAAAGAA
CGTCCTTATTCGTGTGAAATTTGCGACAGAGAGTTCACTCAGCTCGGTCAGGCGAAACGA
CACCTCGCGACTCACACAGGAGATAAACCCTTCGTTTGCGAAGTTTGTGAAAAGACATTC
GCGAGAAAGTTCTACCTCAAAAAACACATGCGAACACACACAAAGGAGAAACCTTTCAAA
TGCATGGTGTGCGATCGAGCGTTCTCGCAGAGCATCCATCTGAAAACGCACATGAAAGTC
CACACGGGGGAACGTCCGTTCGAGTGCGAAACTTGTAAGAAATTATTTGCGAGGAAAGGC
GACCTAACAACACATTTACGAATCCATACTAAAGAGAAACCTCACGCTTGCACGGATTGT
GGAAAAGCATTCACGGACAGGAGTACTTTAATAAAACATCTACGACTTCACTCGGGGGAG
AACGGCGCCGGTCTGAAAACTTGCAAATGCGAAGTTTGTCACAAGCCGTTCTCGACCCTC
GGGGCTCTTAAAACCCACATGGTTCTTCATACGGGTGAAAGACCGTTCCTGTGCGAGGCT
TGCGGTAAAAAGTTTCCACGTAAAGGAGATCTGAGGAGTCATATCAAAGTCCATAAGAAT
TATATTGGAAAGATTGTGGAAATTCCAGCTGATCAAGAACCGTTCTACGTGGAAATAGAA
ATATCGGAA
| SMART |
Znf_C2H2_type (IPR013087) - T[4-26] 7.7 - T[176-198] 1.5E-4 - T[204-226] 5.4E-5 - T[232-254] 0.0087 - T[260-282] 1.2E-4 - T[288-310] 6.2E-4 - T[316-338] 0.0025 - T[344-366] 7.4E-4 - T[377-399] 0.019 - T[405-427] 6.2E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[4-31] 8.787 - T[176-203] 15.667 - T[204-231] 15.417 - T[232-259] 14.004 - T[260-287] 15.667 - T[288-315] 16.311 - T[316-343] 15.625 - T[344-371] 15.147 - T[377-404] 13.38 - T[405-427] 12.05 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[6-26] . - T[178-198] . - T[206-226] . - T[234-254] . - T[262-282] . - T[290-310] . - T[318-338] . - T[346-366] . - T[377-399] . - T[407-427] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[174-226] 3.29E-17 - T[212-269] 3.82E-19 - T[268-325] 6.42E-21 - T[310-362] 3.76E-18 - T[375-427] 1.8E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN112_HUMAN | 45.669 % | 249 | 6.71E-74 |
| ZN300_HUMAN | 47.638 % | 244 | 1.5E-74 |
| ZN570_HUMAN | 44.882 % | 249 | 7.28E-77 |