Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S344.g04444.01.t

Possible name(s)

CYP4F12; CYP4F3; EXOSC10

Gene model

Haaura.CG.MTP2014.S344.g04444

Location

S344 [9,229 / 12,139]

Sequences

Amino acid sequence

Length: 254

>Haaura.CG.MTP2014.S344.g04444.01.p
DDMTLEDLIETRRKTTGRNLDFLDILLLTKDEKGIGLADEEIRAEVDTFMFAGHDTTASG
LSWAIYNLARHPDIQEKCRKEVQGVLGSRKRVEWDDLPKLQYLTMCIKESLRIHPPVIEI
SRTLCSPLYFKRGFGNDQMNLDTKIPRGICDKILPPNTNILIGIMELHQNPYVWKNPSEF
DPNRFTSENVEKRSGYAYVPFSGGPRNCIGQNFAINEMKTVLALALCCYRFRVDESCPEP
LREMRGIHIKIEKL

Nucleotide sequence

Length: 762

>Haaura.CG.MTP2014.S344.g04444.01.t
GATGATATGACATTGGAAGACCTAATTGAAACAAGGAGGAAAACAACCGGTAGGAATCTT
GATTTCCTCGATATTCTTCTTCTGACGAAAGACGAAAAAGGAATCGGACTTGCTGATGAA
GAAATAAGAGCGGAAGTTGACACGTTCATGTTTGCTGGACATGACACTACAGCTAGCGGT
CTATCATGGGCGATATATAATCTAGCAAGACACCCAGATATTCAAGAGAAATGCAGGAAA
GAAGTACAGGGCGTTTTGGGTAGTCGTAAGAGAGTAGAGTGGGATGATCTACCAAAACTG
CAATACTTAACAATGTGCATCAAAGAGAGTCTCAGAATTCATCCACCCGTTATTGAAATC
AGCAGAACATTATGCAGTCCATTGTATTTTAAACGCGGTTTCGGTAACGATCAGATGAAT
TTGGATACCAAGATACCACGCGGAATATGCGACAAGATCCTTCCACCAAATACAAATATC
CTAATTGGCATCATGGAACTCCATCAAAATCCATATGTATGGAAGAACCCGTCGGAATTT
GATCCGAATAGATTCACTTCAGAAAACGTGGAAAAACGTTCTGGATATGCGTACGTACCG
TTTTCAGGCGGACCCAGGAATTGTATTGGCCAAAATTTTGCAATTAACGAAATGAAAACG
GTGTTAGCTCTCGCGCTCTGTTGTTACAGGTTTAGGGTTGACGAGTCCTGCCCGGAACCT
CTGAGGGAGATGCGTGGCATTCACATTAAAATAGAGAAGTTA

InterProScan

Gene3D	Cyt_P450_sf (IPR036396) - T[2-253] 2.9E-81
SUPERFAMILY	Cyt_P450_sf (IPR036396) - T[5-250] 2.75E-75
Pfam	Cyt_P450 (IPR001128) - T[5-247] 9.2E-73
PRINTS	Cyt_P450_E_grp-I (IPR002401) - T[41-58] 3.4E-23 - T[61-87] 3.4E-23 - T[163-187] 3.4E-23 - T[198-208] 3.4E-23 - T[208-231] 3.4E-23
PRINTS	Cyt_P450 (IPR001128) - T[52-69] 3.3E-15 - T[105-116] 3.3E-15 - T[199-208] 3.3E-15 - T[208-219] 3.3E-15
ProSitePatterns	Cyt_P450_CS (IPR017972) - T[201-210] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CP4F2_HUMAN	48.649 %	239	3.68E-76
CP4FC_HUMAN	50.403 %	241	5.64E-77
CP4F8_HUMAN	48.659 %	237	3.1E-75