- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S344.g04444.05.t
Possible name(s)
CYP4F12; CYP4F3; EXOSC10
Gene model
Location
S344 [11,551 / 16,763]
Amino acid sequence
Length: 1,135
>Haaura.CG.MTP2014.S344.g04444.05.p
MANSSNADFDMPQDKKTIPDVDEYSKKVAGALMNAIRCSSSFPSAGDDFDLYNSFPGFRK
FKSEQGARILKHVNDILSHQGLKRFHLLDGHSSRALDIDDATDHLVEVNDTMLERIGSLL
DEASGLTKKKDNEIEKVTQVSIPAVAGTSKPVVSSWNRKSKYGKQQTFRLFHAQNIARPQ
IKFKDKIDNGNLPFVPKIKSKPNSLKPLPQALVDLNCSEQGDVSLAIVNLVRQGRNYKAS
DQSIYDHPYEYELQNLVFTNTQLERVVPQMYPAFPEHPCELTSTKEELLDIIEKLKCVKE
IAVDLEHHSYRSFQGITCLMQISTRTEDFLIDTLAARSHIHMFNQVFTDPSIVKVFHGAN
SDVQWLQRDFGVYVVNMFDTGAASRELSLQRHSLDFLLKKYCDVQADKKYQLADWRVRPL
PEEMRKYAQEDTHYLLYVYDMMKNSLLDVEESSAIASGNTRLMNVMYRSKEICLQRYEKP
LITPNSHLELYEKQHRKQLNENQLELLRLLYSWRDTMARREDESIGYILPKHMLFQIAEI
MPREAHGVLACCNPVPPLVRQNVHVIHELVIEARSKSHSKTKEHSHQKSSQSKVPVPSKP
DIEVYDDILACPHDLSHLNPEKPADKTMSVRVVMNSTSNLFKPSVRETSGSSSTACKSRK
KEEALEKNSWKPFVKFFPEDVDTKALQKLAYISRKFVKTLRAYRVTVATMKGIQGLKKHF
LFGNLQSVEANEEGIAKMLKRTKAFPKMIPLWYGPIFCYLQFHFPDLVKVILATEEPKDN
FAYHFMKPWLGDGLLLSSGKKWKRNRRLLTAIFHFNALKEYATIFNNMAEVLLNKWKITA
EIEDTTDITRDLSLLTLDIMLQCTMSTKSNCQTEEIKNSYVQSVYLLSEMVIQRVMNPLY
YNDFIFNLSPLGRKFRKQCDIAHEYTETVIRKRKELLQRDDMTLEDLIETRRKTTGRNLD
FLDILLLTKDEKGIGLADEEIRAEVDTFMFAGHDTTASGLSWAIYNLARHPDIQEKCRKE
VQGVLGSRKRVEWDDLPKLQYLTMCIKESLRIHPPVIEISRTLCSPLYFKRGFGNDQMNL
DTKIPRGICDKILPPNTNILIGIMELHQNPYVWKNPSEFDPNRFTSENVEKRSGY
Nucleotide sequence
Length: 3,405
>Haaura.CG.MTP2014.S344.g04444.05.t
ATGGCTAATTCTAGTAATGCAGATTTTGATATGCCACAAGATAAAAAGACTATACCGGAC
GTTGACGAATATTCTAAAAAAGTAGCTGGCGCTTTGATGAACGCTATTAGATGTAGCAGT
TCTTTTCCCAGTGCGGGTGATGACTTCGACCTGTACAATAGTTTTCCTGGATTTCGTAAA
TTCAAATCCGAACAAGGCGCAAGAATTTTGAAGCATGTTAATGATATACTGAGCCATCAA
GGGCTGAAACGATTCCATTTACTCGACGGCCATTCCTCTCGTGCTTTGGATATCGATGAC
GCAACTGATCATCTTGTGGAGGTCAATGACACGATGCTGGAGCGGATCGGATCGTTACTC
GATGAAGCATCTGGACTGACCAAAAAGAAGGATAATGAAATAGAAAAAGTTACACAAGTT
AGTATTCCAGCTGTAGCAGGTACTTCCAAGCCCGTGGTTTCTTCTTGGAATAGAAAAAGC
AAATACGGTAAGCAACAGACTTTCAGATTATTCCATGCGCAGAACATTGCTCGACCACAA
ATAAAATTCAAAGACAAAATCGACAACGGCAACCTACCGTTTGTCCCAAAAATTAAATCC
AAACCAAATTCTCTTAAACCATTACCCCAAGCTCTCGTTGACCTCAACTGCTCCGAACAG
GGAGACGTTTCTTTGGCTATTGTTAATCTCGTTCGTCAAGGCCGTAATTACAAGGCGTCA
GACCAAAGCATTTACGATCATCCCTATGAATACGAGTTACAAAATTTGGTGTTTACCAAC
ACGCAGTTGGAGCGCGTTGTACCTCAAATGTACCCAGCCTTTCCCGAACACCCGTGCGAG
CTGACTTCAACGAAAGAAGAGCTGTTGGACATAATTGAAAAACTGAAATGCGTCAAAGAA
ATAGCTGTGGACCTTGAGCATCATTCGTACAGATCTTTTCAAGGTATCACCTGTCTCATG
CAAATATCTACAAGGACTGAAGATTTTCTGATTGACACTCTTGCTGCGCGTTCCCATATC
CACATGTTCAATCAAGTTTTTACCGATCCGAGCATAGTAAAAGTTTTCCACGGTGCGAAT
TCTGATGTACAGTGGCTCCAGCGTGACTTTGGTGTTTATGTCGTTAACATGTTCGACACA
GGCGCTGCTTCCAGGGAGCTGAGTCTGCAAAGGCATTCGTTAGATTTCCTGCTGAAAAAG
TATTGCGACGTACAGGCGGACAAAAAGTACCAGCTTGCCGACTGGAGGGTAAGGCCTCTT
CCTGAAGAGATGCGAAAGTACGCTCAAGAGGACACTCATTATTTACTATACGTGTACGAC
ATGATGAAGAACTCGCTGTTGGATGTCGAAGAGTCGTCTGCTATAGCGTCGGGTAACACG
AGACTGATGAATGTCATGTACAGGAGCAAGGAAATCTGTTTACAAAGATATGAAAAGCCC
CTGATAACTCCGAATTCCCACCTAGAATTATATGAAAAGCAACATAGGAAACAGTTGAAC
GAAAATCAATTAGAACTTCTCAGATTGCTCTACTCTTGGAGAGACACCATGGCAAGACGA
GAGGACGAGAGTATAGGTTACATACTTCCCAAGCATATGCTGTTTCAAATTGCTGAGATA
ATGCCCAGAGAAGCACACGGTGTGCTTGCCTGCTGTAATCCAGTACCTCCATTAGTACGC
CAAAATGTCCATGTCATTCATGAACTCGTTATCGAGGCAAGATCAAAGTCACACAGTAAA
ACCAAAGAACATTCTCATCAAAAATCTTCTCAAAGCAAAGTTCCTGTTCCTTCTAAGCCT
GATATAGAAGTTTATGATGATATTTTAGCTTGTCCACATGACTTGTCCCATCTCAACCCA
GAAAAGCCAGCTGACAAAACGATGTCTGTGCGAGTTGTCATGAATTCCACTTCAAATTTG
TTCAAACCGAGTGTTCGAGAAACCAGTGGTAGTAGCAGTACAGCGTGTAAGAGTAGGAAA
AAAGAGGAGGCATTAGAAAAGAATTCCTGGAAACCATTCGTTAAATTCTTCCCGGAAGAT
GTAGATACCAAAGCGCTGCAAAAACTGGCGTATATCTCTCGAAAATTTGTAAAAACCTTG
AGAGCATATCGTGTCACAGTTGCCACGATGAAAGGGATACAAGGCCTGAAAAAACATTTT
CTATTTGGTAATCTTCAATCAGTAGAGGCAAATGAGGAAGGCATAGCTAAAATGCTGAAA
AGAACCAAGGCATTCCCTAAAATGATTCCACTGTGGTACGGCCCCATATTTTGCTATCTG
CAATTTCATTTCCCCGATCTTGTGAAGGTAATACTGGCCACAGAAGAGCCAAAAGATAAT
TTCGCATACCACTTTATGAAGCCGTGGCTAGGAGACGGTCTGCTTCTAAGTTCCGGGAAG
AAATGGAAAAGGAATAGGCGCTTACTGACTGCTATATTTCACTTCAATGCCCTGAAAGAG
TACGCTACTATATTCAACAACATGGCAGAGGTTCTCTTAAATAAGTGGAAGATAACCGCA
GAGATAGAGGATACCACTGACATTACTCGAGATCTAAGCCTGCTGACTCTAGATATAATG
CTCCAATGTACTATGTCGACAAAATCCAATTGCCAAACTGAAGAAATTAAAAACTCCTAC
GTGCAGTCGGTTTACTTGTTGTCTGAGATGGTCATACAGCGCGTCATGAATCCCCTGTAT
TACAACGACTTCATCTTTAATTTATCTCCTCTGGGAAGAAAATTTCGGAAACAATGCGAC
ATTGCTCATGAGTACACAGAAACTGTTATACGAAAGAGAAAAGAACTGCTGCAAAGGGAT
GATATGACATTGGAAGACCTAATTGAAACAAGGAGGAAAACAACCGGTAGGAATCTTGAT
TTCCTCGATATTCTTCTTCTGACGAAAGACGAAAAAGGAATCGGACTTGCTGATGAAGAA
ATAAGAGCGGAAGTTGACACGTTCATGTTTGCTGGACATGACACTACAGCTAGCGGTCTA
TCATGGGCGATATATAATCTAGCAAGACACCCAGATATTCAAGAGAAATGCAGGAAAGAA
GTACAGGGCGTTTTGGGTAGTCGTAAGAGAGTAGAGTGGGATGATCTACCAAAACTGCAA
TACTTAACAATGTGCATCAAAGAGAGTCTCAGAATTCATCCACCCGTTATTGAAATCAGC
AGAACATTATGCAGTCCATTGTATTTTAAACGCGGTTTCGGTAACGATCAGATGAATTTG
GATACCAAGATACCACGCGGAATATGCGACAAGATCCTTCCACCAAATACAAATATCCTA
ATTGGCATCATGGAACTCCATCAAAATCCATATGTATGGAAGAACCCGTCGGAATTTGAT
CCGAATAGATTCACTTCAGAAAACGTGGAAAAACGTTCTGGATAT
| Pfam |
Exosome-assoc_fac_Rrp6_N (IPR012588) - T[33-125] 3.3E-17 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[176-480] 8.35E-78 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[279-447] 3.4E-47 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[282-446] 3.1E-46 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[492-580] 6.76E-24 |
| SMART |
HRDC_dom (IPR002121) - T[500-580] 5.7E-21 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[500-580] 16.158 |
| Pfam |
HRDC_dom (IPR002121) - T[503-570] 7.3E-14 |
| Gene3D |
Cyt_P450_sf (IPR036396) - T[709-1135] 4.7E-90 |
| Pfam |
Cyt_P450 (IPR001128) - T[715-1132] 3.2E-84 |
| SUPERFAMILY |
Cyt_P450_sf (IPR036396) - T[717-1134] 6.55E-82 |
| PRINTS |
Cyt_P450_E_grp-I (IPR002401) - T[980-997] 6.5E-14 - T[1000-1026] 6.5E-14 - T[1102-1126] 6.5E-14 |
| PRINTS |
Cyt_P450 (IPR001128) - T[991-1008] 1.2E-5 - T[1044-1055] 1.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CP4F2_HUMAN | 41.784 % | 348 | 4.31E-108 |
| EXOSX_HUMAN | 46.615 % | 579 | 0 |
| CP4FC_HUMAN | 42.723 % | 351 | 3.82E-109 |