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TRANSCRIPT CARD

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  1. Clone 'cieg001o10'
  2. Transcript 'KH2012:KH.L18.125.v4...'
  3. Transcript 'KH2012:KH.S910.2.v4....'
  4. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S3451.g10260.01.t

Possible name(s)

Haaura.CG.MTP2014.S3451.g10260

Location

S3451 [1,593 / 4,330]

Sequences

Amino acid sequence

Length: 496

>Haaura.CG.MTP2014.S3451.g10260.01.p
MAELFKTVEPMICMQEESKKFDLEYDLKETANNDVKQKKYVRAFLYYFSASKFYKEKYLG
DDAAQGIKACAQAVEMFVEEMIKQDDGKKIVTDYVIPALKEVTDDLSKISNADPRYQVRL
QAWCLQSIGLCYKHCEDYQQFADNAESAIELLKRELKEDADKYRVFGICLHSSGEAHEKL
DRKGQAIDLYERAIEAKNDANDWPSKQSKHDSKELSREKLENIVNNAFDDSRIFIKTYKF
SEAVDLFREIEPMLRDVEGKIKSQLMKIECYMMMVKPLKVVRQLDELVRLMLTSKKTVAD
VKKMAKDDVTAKLCISGYLRYFSACKLYKEKSAGNDAVKGIKACVTSVQLLVERMMNRDE
KMKKIVTDYIIPALEEVTDDLSKIPNSDREVQVEQQAWCLFNIALCYGYCQDYQREVEFN
ESAIELMKKGLKEDAEKYYVVGYCYHNAAFTNFRFNQREKSKEMFRNALDVYNKATDWPN
EEKKKKEIKQTENILR

Nucleotide sequence

Length: 1,488

>Haaura.CG.MTP2014.S3451.g10260.01.t
ATGGCTGAATTATTCAAAACTGTTGAACCAATGATCTGCATGCAAGAAGAATCCAAGAAA
TTTGACTTGGAATACGACTTGAAGGAAACGGCAAATAATGACGTCAAACAAAAAAAATAT
GTTCGAGCATTTCTTTACTATTTCTCGGCGAGTAAATTTTACAAAGAAAAATATCTTGGT
GATGATGCAGCGCAAGGTATCAAGGCATGTGCACAAGCTGTTGAGATGTTTGTGGAAGAA
ATGATCAAACAGGATGACGGGAAGAAGATCGTCACCGATTACGTCATCCCAGCACTGAAA
GAAGTCACCGATGATCTGAGCAAAATCTCAAATGCAGATCCAAGATATCAAGTCAGATTG
CAAGCCTGGTGTTTACAGAGTATTGGATTGTGCTACAAACATTGCGAAGATTATCAACAA
TTTGCCGACAATGCTGAATCTGCCATCGAGCTCTTGAAGAGAGAATTAAAGGAAGATGCC
GATAAATATCGGGTGTTTGGAATTTGTCTTCATAGTTCTGGTGAAGCTCATGAGAAACTG
GATCGAAAGGGGCAAGCAATTGATCTGTATGAAAGAGCTATCGAGGCAAAGAACGATGCA
AATGACTGGCCGAGTAAACAGAGTAAACATGACAGTAAGGAGCTGTCGCGGGAAAAGCTG
GAGAATATAGTGAACAACGCATTTGATGATTCAAGAATCTTTATAAAGACCTACAAGTTC
TCTGAAGCTGTGGATCTTTTTCGTGAAATCGAACCGATGCTCAGAGATGTGGAAGGAAAA
ATAAAATCTCAGCTGATGAAGATAGAATGCTACATGATGATGGTAAAACCTCTTAAGGTG
GTTAGACAGTTGGATGAACTTGTTCGACTGATGCTTACATCAAAGAAAACAGTCGCTGAT
GTCAAGAAAATGGCAAAAGATGATGTCACAGCGAAGCTTTGCATAAGTGGATATCTTCGT
TATTTCTCTGCATGCAAATTATACAAAGAGAAATCTGCTGGGAATGATGCAGTTAAAGGT
ATCAAAGCATGTGTGACTTCTGTGCAACTGTTAGTTGAGAGAATGATGAACCGAGATGAA
AAGATGAAGAAGATTGTCACAGATTACATCATCCCAGCACTGGAGGAAGTCACAGATGAT
CTGAGCAAAATCCCAAATTCAGATCGAGAAGTTCAAGTTGAGCAACAGGCTTGGTGTTTG
TTCAACATTGCGTTGTGTTACGGCTACTGCCAGGATTATCAACGAGAAGTCGAATTTAAT
GAATCTGCAATTGAACTGATGAAGAAAGGATTGAAGGAAGATGCTGAGAAGTATTACGTG
GTTGGATATTGCTACCACAATGCTGCTTTTACTAACTTTCGCTTTAATCAACGTGAGAAA
TCTAAAGAAATGTTCAGAAACGCACTGGATGTTTACAACAAAGCAACTGACTGGCCTAAT
GAGGAAAAAAAGAAGAAAGAAATCAAGCAAACAGAAAATATTCTGAGA

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[36-58] 2.53E-7 - T[106-198] 2.53E-7 - T[393-473] 5.22E-6
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[108-243] 3.6E-8 - T[371-494] 1.3E-7
SMART
TPR_repeat (IPR019734) - T[122-155] 150.0 - T[167-200] 12.0 - T[397-430] 67.0 - T[442-475] 270.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value