- EST 'AHC0AAA140YM02_RM1' >
- Molecular Tool 'Etr>Onecut-WRPW (D'Aniello 2011)' >
- Transcript 'Moocci.CG.ELv1_2.S47...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S3494.g10281.01.t
Possible name(s)
ZNF227; ZNF234; ZNF420
Gene model
Location
S3494 [4,104 / 6,488]
Amino acid sequence
Length: 443
>Haaura.CG.MTP2014.S3494.g10281.01.p
MVIHCEVCDLPCLRESHLKIHMRKHTKERPFPCDVCSKRFTRKEQLIIHKRYHTGEKPFG
CNICDKYFFSENVVKKHMRTHMKPYECEVCSMKFRDKSRYSYHIKFMHSEMNCKCLVCGN
IFTSKYGLKIHMEEHKGSDKKYHCEVCDLPCRGGVTLQRHMRKHTEEKPFPCDVCFKGFS
RRANLNVHMRIHTSEKSYQCEVCSIAFQRRKECNEHMKFMHSKINCKCSVCGNIFTSEYD
LKIHLKEHEGSDDKYHCEVCDLPCPSESNLKMHMRKHTKERPFQCDVCCKGFAHNAHLKE
HQRIHTNEKPYQCEVCNKRFTRKDKLKVHQRIHTNEEPYQCEVCSMTFKQNSARKKHEKR
WHSRMDYECLACNNNFTSKYGLKIHMEEHKRSDGKYHCDVCDLPCPSKTGLKIHMRKHTR
EKPFICEICDRDYAHRRSLKLHL
Nucleotide sequence
Length: 1,329
>Haaura.CG.MTP2014.S3494.g10281.01.t
ATGGTGATACATTGTGAGGTTTGCGACTTACCATGCCTAAGAGAATCTCATCTCAAAATC
CACATGAGAAAACACACAAAGGAAAGGCCGTTCCCGTGTGATGTTTGCTCCAAGAGATTT
ACACGAAAAGAGCAATTAATAATACACAAGAGGTATCATACAGGAGAAAAACCATTCGGA
TGTAACATATGTGACAAATATTTTTTCAGTGAAAACGTGGTTAAGAAACACATGAGAACT
CACATGAAACCATATGAATGCGAAGTCTGTTCCATGAAATTTAGGGATAAATCAAGGTAC
AGTTATCATATCAAATTCATGCATAGTGAAATGAACTGCAAGTGTTTGGTATGTGGAAAT
ATATTCACATCTAAATATGGCTTGAAGATACATATGGAAGAACATAAAGGATCGGATAAG
AAATATCATTGTGAAGTTTGCGATTTACCATGTAGAGGTGGAGTTACACTCCAGAGACAT
ATGAGAAAACACACGGAGGAAAAACCGTTTCCGTGTGATGTATGCTTCAAAGGATTTTCA
CGAAGGGCAAATTTAAACGTCCACATGAGGATTCACACCAGCGAGAAATCATATCAGTGT
GAAGTCTGTTCGATTGCATTTCAACGAAGGAAAGAGTGCAACGAACACATGAAATTCATG
CATAGTAAAATAAACTGCAAGTGTTCGGTTTGTGGAAATATATTCACATCTGAATATGAT
TTGAAGATACATTTGAAAGAACATGAAGGATCTGATGACAAATATCATTGTGAAGTTTGC
GATTTACCATGTCCAAGTGAATCTAATCTCAAAATGCACATGAGAAAACATACAAAGGAA
AGGCCGTTTCAGTGTGATGTTTGCTGCAAAGGATTTGCACACAATGCACACTTAAAAGAA
CACCAGAGAATTCATACGAACGAGAAACCATATCAATGTGAAGTTTGCAACAAGAGATTT
ACACGAAAAGATAAGTTAAAAGTCCACCAGAGAATTCATACGAATGAGGAACCATATCAA
TGTGAAGTCTGTTCCATGACATTTAAACAGAACTCAGCGCGAAAAAAACATGAGAAAAGA
TGGCACAGTAGGATGGACTACGAATGTTTGGCATGTAATAATAATTTCACATCTAAATAT
GGCTTGAAGATACATATGGAAGAACATAAAAGATCAGATGGAAAATATCATTGTGATGTT
TGCGACTTACCATGTCCAAGTAAAACTGGCCTCAAAATCCACATGAGAAAACACACAAGG
GAAAAACCTTTCATATGTGAAATCTGTGATAGAGATTATGCACATAGACGTTCGTTGAAA
TTACACCTA
| SMART |
Znf_C2H2_type (IPR013087) - T[3-25] 0.43 - T[31-53] 0.0021 - T[59-81] 0.0093 - T[85-108] 0.0097 - T[113-135] 0.094 - T[142-164] 0.017 - T[170-192] 8.6E-4 - T[198-221] 0.008 - T[226-248] 0.015 - T[255-277] 0.001 - T[283-305] 0.035 - T[311-333] 5.7E-5 - T[339-362] 2.5 - T[367-389] 0.1 - T[396-418] 0.0013 - T[424-443] 210.0 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[3-30] 10.949 - T[31-58] 16.082 - T[59-86] 10.512 - T[85-109] 9.972 - T[111-140] 9.93 - T[142-169] 11.323 - T[170-197] 14.482 - T[198-222] 9.66 - T[226-253] 10.554 - T[255-282] 12.05 - T[283-310] 15.916 - T[311-338] 16.207 - T[339-367] 9.806 - T[367-394] 9.743 - T[396-423] 11.468 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[4-34] 9.19E-7 - T[25-77] 1.38E-17 - T[83-135] 5.99E-10 - T[156-207] 2.24E-18 - T[192-244] 2.61E-9 - T[254-305] 2.18E-13 - T[292-348] 4.11E-21 - T[338-389] 1.95E-9 - T[396-443] 4.94E-12 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[5-25] . - T[33-53] . - T[61-81] . - T[87-108] . - T[113-135] . - T[144-164] . - T[172-192] . - T[226-248] . - T[257-277] . - T[285-305] . - T[313-333] . - T[341-362] . - T[369-389] . - T[398-418] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN234_HUMAN | 34.904 % | 279 | 5.66E-87 |
| ZN227_HUMAN | 36.636 % | 280 | 1.72E-86 |
| ZN420_HUMAN | 36.591 % | 278 | 1.14E-86 |