- Transcript 'KH2012:KH.C8.38.v3.A...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R25....' >
- Transcript 'Moocul.CG.ELv1_2.S13...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S34.g00914.01.t
Possible name(s)
FZD1; FZD6; SMO
Gene model
Location
S34 [2,621 / 8,999]
Amino acid sequence
Length: 781
>Haaura.CG.MTP2014.S34.g00914.01.p
FSFVKILKCSSIVSRITMTFNNSFGSEGDCQKATTEKCIPLNGTTCFGAQLDYMYTSIEL
ADDSDTLHMANQKLLLWSGLRSVPKCWEVIQPLLCSLYLPKCGNNTIHLPDRTLCQKTRL
PCKIVEIENGWPGFMLCENDKVFGDNCPETINTNQFNKSDCETPLMATSNPSSWYEGVEG
CGLQCMNPLFDQAEHDDMHLFIAVCSSITMVCTLFAMLSFFIDWKNSSKYPARIIFYINV
CFFLCSFGWLAQFFQEGRNEIVCRRDGTARLGEPVGQGESPSCVIIFVLVYFFVMAGTAW
FVVLSYSWMLMFKALGSEQQPLKGKTLYFHLFVWSVSFILLIASLAVSQIDGNSMSGICF
IGYKNHWYRMGFLLVPIGMMLFTGGFFLFGGLHALLTIKNSHDGLLSENAVSKITWTMIR
IGVFAFFAFFFVIIAFAADAYEIVNQPMWDRSFRNYIRCEANITILEKLNEEIVDPASRD
CHIANRPNISVMKLHLFAMFGTGIVMSAWVWTRASLMNWRRAWFKLIGRSDNEMKRIRRR
SKMIAKAFANRHALGIGKRKTVRDTEEEDNSGGINPEDLEFSEHTMTHQDPVGMDFDLNS
VSQELSSEWIRQVPQMVRRRGAIMPQPMPSSSPVPSSHQDVDDDGVNISWARAKNKSSGS
TPNRSINELPPLRTSRTSRKTSDNNANSPWHVPTYETRVFQPQIEESFPGFIREDQFQEG
EIYNEQRYHGISEEPSQIPLGTPCSNTDVLSVRHKANTSLTRPPLRSLGDKPTTSTREAW
*
Nucleotide sequence
Length: 2,343
>Haaura.CG.MTP2014.S34.g00914.01.t
TTTAGCTTTGTTAAAATATTAAAATGTAGCAGTATAGTAAGTCGAATAACAATGACATTC
AACAATTCCTTTGGAAGCGAAGGGGATTGCCAAAAGGCAACGACTGAAAAATGCATTCCA
CTGAACGGAACTACGTGTTTCGGAGCGCAACTCGACTATATGTACACTTCGATAGAACTG
GCGGATGATTCCGACACTTTACATATGGCGAATCAAAAGCTATTATTGTGGTCAGGACTC
AGAAGTGTTCCCAAGTGCTGGGAAGTTATACAACCGTTACTCTGTTCTCTTTACTTGCCT
AAATGTGGAAACAATACTATTCATCTCCCTGACAGAACTCTATGTCAGAAGACCCGCTTG
CCTTGCAAGATCGTCGAAATTGAAAATGGCTGGCCAGGGTTTATGCTTTGCGAAAACGAT
AAAGTATTTGGAGACAATTGTCCTGAAACGATCAACACCAATCAGTTCAACAAATCAGAC
TGTGAAACACCTCTCATGGCAACATCCAATCCCTCCTCTTGGTACGAAGGAGTAGAGGGA
TGTGGTCTGCAATGCATGAACCCGCTATTTGATCAGGCGGAGCACGACGACATGCACCTG
TTCATTGCTGTATGTAGCTCAATAACGATGGTCTGTACCTTGTTTGCGATGCTTTCCTTT
TTCATTGACTGGAAGAATTCGAGCAAGTATCCGGCACGAATCATATTCTACATCAATGTC
TGCTTCTTTCTGTGTAGTTTCGGCTGGCTAGCTCAGTTTTTTCAAGAAGGAAGAAACGAA
ATCGTTTGTAGAAGGGATGGTACGGCTAGGCTAGGTGAACCAGTTGGTCAAGGAGAATCC
CCATCCTGTGTGATCATTTTTGTCCTCGTCTACTTTTTTGTGATGGCTGGCACTGCCTGG
TTCGTTGTTTTGTCCTATTCCTGGATGCTGATGTTTAAAGCGCTGGGATCTGAACAGCAG
CCGCTCAAGGGAAAGACTCTATATTTCCATTTGTTTGTGTGGTCAGTTTCGTTCATACTT
TTGATAGCTTCACTCGCCGTGTCTCAGATCGATGGTAATTCCATGAGTGGGATATGCTTT
ATCGGCTACAAAAATCATTGGTACAGAATGGGTTTCTTGCTTGTGCCAATCGGCATGATG
CTCTTCACTGGTGGATTTTTCCTTTTCGGTGGATTGCACGCCCTGCTGACCATTAAAAAC
AGCCATGATGGACTATTGAGCGAGAATGCGGTGTCAAAAATAACATGGACTATGATAAGG
ATAGGAGTTTTTGCCTTCTTCGCATTCTTTTTCGTGATCATAGCGTTTGCTGCTGATGCC
TACGAAATTGTGAACCAGCCTATGTGGGACAGAAGCTTCCGTAATTATATCAGATGCGAG
GCCAACATCACAATTTTGGAGAAACTAAATGAGGAAATTGTGGATCCTGCCTCCAGAGAT
TGTCATATTGCCAACCGACCAAATATCTCAGTGATGAAGCTTCACTTGTTTGCAATGTTT
GGGACAGGTATTGTCATGAGTGCTTGGGTGTGGACACGTGCTTCGTTGATGAACTGGCGC
CGTGCATGGTTCAAACTGATAGGGAGAAGTGACAACGAAATGAAAAGAATCAGAAGGAGG
AGCAAGATGATTGCGAAAGCGTTCGCAAACCGCCATGCATTGGGCATTGGTAAAAGAAAG
ACAGTACGTGACACCGAAGAGGAAGATAACAGCGGTGGCATCAATCCAGAAGATTTAGAG
TTCAGTGAGCATACAATGACTCATCAGGATCCAGTTGGAATGGATTTTGATCTAAATAGT
GTTTCTCAGGAACTGTCATCTGAGTGGATACGACAGGTGCCTCAGATGGTCAGACGTCGT
GGTGCAATAATGCCGCAACCAATGCCATCAAGTTCGCCTGTGCCCTCTTCACATCAGGAC
GTAGATGATGACGGCGTGAACATAAGTTGGGCACGTGCAAAAAATAAGAGTTCAGGTTCA
ACCCCTAACAGAAGTATCAATGAGCTGCCGCCTCTAAGAACATCGAGAACTTCCAGGAAA
ACTTCTGACAACAATGCAAACTCTCCTTGGCATGTACCGACATACGAAACAAGAGTTTTT
CAGCCTCAAATCGAAGAGTCCTTCCCTGGGTTCATTAGAGAAGACCAATTTCAAGAGGGT
GAAATTTATAATGAGCAGAGGTACCATGGTATCAGTGAGGAACCATCTCAAATTCCATTA
GGCACACCTTGTAGTAACACAGATGTGCTAAGTGTCCGTCACAAGGCCAACACTTCTCTG
ACAAGACCTCCTCTTAGGTCTTTGGGTGACAAGCCAACGACTTCTACCAGAGAGGCATGG
TGA
| PANTHER |
Frizzled/SFRP (IPR015526) - T[18-681] 7.3E-249 |
| PANTHER |
SMO (IPR026544) - T[18-681] 7.3E-249 |
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[19-147] 9.5E-37 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[33-150] 14.22 |
| SMART |
Frizzled_dom (IPR020067) - T[37-152] 3.8E-19 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[37-148] 6.8E-18 |
| Pfam |
Frizzled_dom (IPR020067) - T[38-139] 3.8E-10 |
| SMART |
Frizzled/Smoothened_TM (IPR000539) - T[188-529] 3.6E-117 |
| Pfam |
Frizzled/Smoothened_TM (IPR000539) - T[189-525] 2.2E-84 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[198-462] 25.239 |
| PRINTS |
Frizzled/Smoothened_TM (IPR000539) - T[201-223] 2.9E-39 - T[230-252] 2.9E-39 - T[285-309] 2.9E-39 - T[329-352] 2.9E-39 - T[374-396] 2.9E-39 - T[417-438] 2.9E-39 - T[491-511] 2.9E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZD1_HUMAN | 26.908 % | 167 | 8.49E-44 |
| FZD6_HUMAN | 25.651 % | 162 | 8.1E-42 |
| SMO_HUMAN | 53.496 % | 674 | 0 |