- Transcript 'KH2012:KH.C7.67.v1.C...' >
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- Transcript 'KH2012:KH.C6.158.v2....' >
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- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S353.g04519.01.t
Possible name(s)
POC1B; TAF5; TAF5L
Gene model
Location
S353 [7,220 / 17,278]
Amino acid sequence
Length: 559
>Haaura.CG.MTP2014.S353.g04519.01.p
LPERKILVKGRMKRARSEQMQALILSYLKKRNYADSETTFKFDFKFEESIKAMASRATAE
ADLSSSLNPVSLTAFSIDEYFSSLEDFKNFAGKTAGAGSDITGASLYDLYSNGDPDDNEV
LPDLQSDIKKQKTEKEKISDDKSTPKQEAVILSAPSMLSPSTPLSVDPSLPMIPEVDAKT
LRASIQSVYETKPMIGNVCLHRLQNAGSIGLTHVTLSNKLQLLCTGHEDSTARLWNFTSN
PSISSNQTGSVDDPKPFQKPDRCRGSCQKSPDVSKIQLACHFYDSIQERLAKNSGSNANK
NSGCKCLRAHSGTVYASRFSHDDQYLLTSSEDTTVRLWETMSCKNKVIYRGHSYPVWCIA
MSSYSLYFATGSQDKAARLWTTERTFPVRTFAGHHGDVESVEFHGNASYLASADKTIRLW
DLGSGKTVRLMLGHWASVGCLAFSPSGKYLASSGEDGRVRMWDIGSGVLIKEFRGHNGMV
YSLDFSQDGSMLASGGLDSNLFVWNTRTSQSPNTRNNTDTDDPNQNPDLIGKWNLSSGSI
HTVKFEACNLLHCIVSER*
Nucleotide sequence
Length: 1,677
>Haaura.CG.MTP2014.S353.g04519.01.t
TTACCTGAAAGGAAGATCCTGGTAAAAGGGAGGATGAAACGTGCGCGTAGTGAACAGATG
CAAGCTCTGATTCTTTCGTATCTGAAGAAACGAAATTACGCTGATTCGGAAACGACTTTC
AAATTCGACTTCAAATTTGAAGAATCAATCAAGGCTATGGCATCTCGTGCCACTGCAGAA
GCTGACCTTTCGTCTTCACTTAATCCTGTTTCGCTCACCGCCTTCAGCATTGACGAATAC
TTTTCTTCATTGGAAGATTTCAAAAATTTCGCTGGGAAAACTGCAGGAGCTGGTTCGGAT
ATTACAGGGGCTAGCCTATATGATTTGTATTCGAACGGAGATCCTGATGATAATGAAGTT
CTCCCCGACTTGCAGAGCGATATAAAAAAACAGAAGACAGAGAAGGAGAAGATATCGGAT
GATAAATCTACGCCCAAACAAGAAGCAGTGATCCTTTCGGCACCTTCGATGCTGTCTCCT
TCGACACCCCTCTCAGTGGATCCCAGCCTTCCAATGATTCCGGAAGTTGATGCAAAAACC
CTTCGCGCTTCGATACAGAGCGTGTATGAAACCAAACCAATGATTGGAAATGTTTGTCTA
CACAGGTTACAAAATGCCGGATCTATTGGTCTTACTCACGTCACACTTTCAAATAAACTC
CAGTTATTATGCACAGGCCATGAAGATTCAACAGCTCGTCTTTGGAATTTTACATCGAAT
CCTTCAATATCATCTAATCAAACTGGCTCTGTTGATGATCCAAAACCATTTCAAAAACCT
GACCGATGCCGCGGGTCATGCCAAAAGTCTCCTGACGTTTCAAAAATTCAACTGGCTTGT
CATTTCTACGACAGCATACAGGAGAGACTCGCTAAAAATTCCGGATCAAATGCGAATAAA
AATTCGGGGTGTAAATGTCTTCGAGCACATTCAGGAACCGTTTACGCGTCCCGTTTCAGT
CACGATGATCAGTATTTGCTAACTAGTTCAGAAGACACTACAGTTCGACTCTGGGAAACT
ATGTCATGCAAGAATAAAGTCATTTACAGAGGTCACAGTTATCCTGTGTGGTGCATAGCG
ATGAGTTCATACAGCTTATACTTTGCCACTGGTTCGCAAGACAAAGCCGCACGTCTTTGG
ACAACCGAGAGAACCTTTCCCGTACGAACGTTCGCTGGTCACCACGGCGATGTGGAGTCA
GTCGAGTTCCACGGGAACGCCTCGTACTTAGCAAGCGCAGACAAAACTATTCGGTTATGG
GATCTCGGTAGCGGAAAGACTGTGAGGTTAATGCTTGGGCATTGGGCATCCGTGGGATGT
TTAGCATTTTCACCCAGCGGAAAATACCTCGCATCGTCGGGAGAAGACGGCCGGGTCAGA
ATGTGGGACATCGGTTCCGGTGTATTAATCAAGGAGTTCAGAGGTCACAATGGTATGGTT
TATTCGCTCGATTTTAGCCAAGACGGAAGCATGCTAGCGTCAGGCGGTTTAGACTCTAAT
TTATTTGTTTGGAATACAAGAACGAGTCAGTCACCTAATACAAGGAATAATACAGACACC
GACGATCCAAACCAGAATCCTGATTTGATCGGCAAATGGAATCTGTCATCTGGCTCCATT
CACACTGTTAAATTTGAGGCGTGCAATCTTCTGCATTGTATTGTATCAGAAAGGTGA
| SMART |
WD40_repeat (IPR001680) - T[196-236] 0.76 - T[300-339] 1.0E-6 - T[342-381] 7.6E-6 - T[384-421] 1.3E-5 - T[424-463] 2.8E-7 - T[466-505] 5.6E-10 |
| Pfam |
WD40_repeat (IPR001680) - T[199-236] 0.16 - T[306-338] 1.1E-4 - T[346-380] 5.5E-5 - T[387-421] 9.4E-7 - T[427-463] 1.2E-8 - T[469-505] 5.1E-7 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[210-239] 3.4E-64 - T[301-511] 3.4E-64 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[211-412] 4.0E-32 - T[413-553] 2.6E-36 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[223-237] . - T[326-340] . - T[408-422] . - T[450-464] . - T[492-506] . |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[307-339] 14.017 - T[349-390] 11.511 - T[391-430] 11.544 - T[431-472] 16.123 - T[473-514] 15.922 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[307-514] 52.73 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[326-340] 1.1E-6 - T[408-422] 1.1E-6 - T[450-464] 1.1E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1B_HUMAN | 31.683 % | 125 | 5.27E-31 |
| TAF5_HUMAN | 39.871 % | 231 | 6.85E-67 |
| TAF5L_HUMAN | 36.768 % | 267 | 5.8E-82 |