Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S3553.g10321.02.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S3553.g10321

Location

S3553 [722 / 4,259]

Sequences

Amino acid sequence

Length: 284

>Haaura.CG.MTP2014.S3553.g10321.02.p
DINATESQLDILINNAGVMMCPQSETKDGFEMQIGTNHLGHFLLTNLLLDLIKRSAPSRI
VTVSSTAGHSKQLGADIYWDDLNLKKSYTPAKAYAQSKLCNVLFSKELAKRLEGTKVTTY
SLHPGIVQTELARHVGTHERPTMLDRMMSWSLVFSKLIAKTPVQGAQTSIYCAVAPELEN
VTGKYYADCKEAGESANAKKKDYPERLWKVSEDLTGLKEESGKENVENSKSEGERVKQSE
EPQKTPEQSEEQQKTPEQSEEPQKTPEQSEEQQKTPEQSEEQQS

Nucleotide sequence

Length: 852

>Haaura.CG.MTP2014.S3553.g10321.02.t
GACATCAATGCTACTGAATCTCAGCTGGATATTCTTATTAATAACGCAGGGGTGATGATG
TGCCCCCAATCCGAGACCAAGGATGGGTTCGAGATGCAGATTGGGACGAATCATCTGGGG
CATTTTCTGTTGACGAATTTGCTTTTGGATCTGATAAAGAGAAGTGCTCCGAGTAGGATC
GTGACAGTGTCATCCACAGCTGGACATTCCAAGCAGCTTGGTGCTGATATTTATTGGGAT
GATTTGAATTTGAAGAAGAGCTACACTCCTGCCAAAGCGTACGCTCAAAGCAAGTTATGC
AATGTTCTTTTTTCCAAGGAACTCGCAAAACGCCTCGAAGGAACCAAGGTCACGACCTAT
AGCCTGCATCCAGGAATTGTGCAGACGGAGTTGGCGCGACATGTCGGGACTCACGAACGC
CCCACGATGCTGGATCGGATGATGTCATGGTCTTTAGTTTTCTCGAAATTGATAGCGAAA
ACTCCAGTCCAAGGAGCGCAGACATCCATTTACTGCGCGGTCGCACCAGAGCTCGAAAAC
GTCACTGGAAAATACTACGCGGATTGCAAGGAAGCTGGCGAATCTGCCAATGCTAAGAAG
AAAGATTATCCGGAGCGTCTGTGGAAAGTGAGCGAAGATTTGACAGGCCTGAAAGAGGAG
AGTGGGAAAGAAAATGTAGAAAATAGCAAAAGTGAGGGAGAACGAGTGAAACAGAGTGAG
GAGCCGCAGAAAACTCCTGAGCAGAGTGAAGAGCAGCAGAAAACTCCTGAGCAGAGTGAG
GAGCCGCAGAAAACTCCAGAGCAGAGTGAGGAGCAGCAGAAAACTCCAGAGCAGAGTGAA
GAGCAGCAGAGT

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[4-190] 3.42E-33
PRINTS	SDR_fam (IPR002347) - T[7-18] 7.1E-11 - T[7-18] 3.0E-6 - T[52-68] 7.1E-11 - T[58-66] 3.0E-6 - T[94-113] 7.1E-11 - T[94-113] 3.0E-6 - T[115-132] 7.1E-11
Pfam	SDR_fam (IPR002347) - T[7-78] 3.4E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	54.673 %	207	1.78E-65
RDH14_HUMAN	52.358 %	204	4.8E-64
RDH12_HUMAN	52.535 %	201	2.03E-63