- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C7.328.v1....' >
- Transcript 'KH2012:KH.C8.209.v1....' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S3553.g10321.03.t
Possible name(s)
RDH12; RDH13
Gene model
Location
S3553 [3,161 / 4,103]
Amino acid sequence
Length: 314
>Haaura.CG.MTP2014.S3553.g10321.03.p
MAESKVKTIIKGFVNPEIKIPGKTVIITGANTGIGFVTAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKKLDLSSFESIREFAADINDTESRLDVLINNAGVMMCPQSETK
DGFELQFGTNHLGHFLMTNLLLDLVKKSPPARIIHVSSSAHYGWFGAAIHWDDLNFTKNY
DSIKAYGQSKLSNVLFSRELSKKLQGTGVTSNSLEPGAVKTDLQRHVGTHERPSFRDRLM
SFVTYFTRWSWSTPEKGAQTTIYLAVAPELAEVSGKYYADCKLKEESADAKKDDFAERLW
NISEELTGLKPKSE
Nucleotide sequence
Length: 942
>Haaura.CG.MTP2014.S3553.g10321.03.t
ATGGCTGAAAGCAAAGTGAAGACGATTATCAAGGGTTTCGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTCGTAACCGCTGTA
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTCGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCTATCCGGGAATTCGCCGCTGACATCAACGATACCGAATCT
CGACTGGATGTTCTCATTAATAACGCAGGGGTGATGATGTGCCCCCAGTCTGAGACCAAG
GATGGTTTCGAGCTGCAGTTTGGGACGAATCACTTGGGTCATTTCTTGATGACGAATCTG
TTGCTGGATTTGGTGAAGAAGAGTCCGCCTGCTCGCATCATACATGTATCTTCTAGTGCT
CATTATGGATGGTTCGGAGCTGCGATTCATTGGGATGATTTGAATTTCACTAAGAATTAC
GATTCCATTAAGGCTTATGGCCAAAGCAAGTTGAGCAATGTGCTTTTCTCTAGAGAGTTA
AGCAAGAAGCTGCAAGGCACTGGTGTTACATCAAATAGTTTGGAACCTGGAGCTGTTAAG
ACGGATTTACAGAGGCATGTTGGAACACATGAGAGGCCTTCGTTCAGGGACCGGTTGATG
TCTTTTGTCACTTATTTCACAAGATGGTCGTGGAGCACCCCAGAAAAGGGGGCTCAAACC
ACGATTTACTTAGCAGTTGCCCCAGAGCTTGCAGAAGTCAGCGGAAAGTATTACGCAGAC
TGCAAACTAAAAGAAGAGTCGGCCGATGCGAAGAAAGATGATTTTGCAGAGAGATTGTGG
AATATCAGCGAAGAGCTAACCGGGCTGAAACCGAAAAGTGAG
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[21-283] 2.98E-58 |
| Pfam |
SDR_fam (IPR002347) - T[23-160] 3.8E-26 |
| PRINTS |
SDR_fam (IPR002347) - T[24-41] 3.0E-18 - T[100-111] 3.0E-18 - T[100-111] 7.2E-6 - T[145-161] 3.0E-18 - T[151-159] 7.2E-6 - T[186-205] 3.0E-18 - T[186-205] 7.2E-6 - T[207-224] 3.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 43.849 % | 259 | 1.21E-85 |
| RDH13_HUMAN | 50.968 % | 275 | 1.47E-91 |
| RDH12_HUMAN | 47.742 % | 259 | 1.16E-85 |