- Transcript 'KH2012:KH.C13.126.v1...' >
- Transcript 'KH2012:KH.C1.596.v2....' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S3553.g10322.01.t
Possible name(s)
RDH12; RDH13
Gene model
Location
S3553 [6,008 / 6,980]
Amino acid sequence
Length: 321
>Haaura.CG.MTP2014.S3553.g10322.01.p
MSVKPVETVIRGWVNPEIKIPGKTVIITGANTGIGFATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSESVVLKKLDLSSFESIREFAADINATESRLDVLINNAGVFLCPQSNTE
DGFETHLGVNHLGHFLLTNLLLDLMKRSAPSRIVTVSSIAHQKWVGGVIQWDDLNHINDV
YNPFTCYSQSKLCNVMFSRELSKKLHGTGVTSNSLEPGTVQTDAFRHLNTYELQTFTERF
SSFMMRIAKWLFKTPEKGAQTSIYLAVAPELAEDSVKYYYDCKQTEESADAKNDHFAERL
WKISEKFVGLKTGSEEGEVE*
Nucleotide sequence
Length: 972
>Haaura.CG.MTP2014.S3553.g10322.01.t
ATGTCTGTAAAACCTGTGGAAACTGTCATCAGAGGTTGGGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTTGCAACCGCTGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTCGAAGAATCAAAATCAGAGAGCGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCTATTCGAGAATTTGCCGCTGACATCAATGCTACCGAATCT
CGACTGGATGTTCTTATTAATAACGCAGGGGTTTTCTTGTGCCCCCAATCGAATACCGAG
GATGGGTTCGAGACGCATTTAGGGGTCAATCACCTGGGACATTTTCTGTTGACGAATCTG
TTGTTGGATTTGATGAAAAGAAGTGCACCAAGTCGAATTGTGACTGTGTCTTCGATTGCT
CATCAGAAATGGGTTGGAGGTGTAATTCAATGGGACGATTTAAACCACATTAATGATGTT
TACAATCCGTTTACGTGTTATTCACAGAGTAAGCTGTGCAATGTTATGTTCTCGAGAGAA
CTAAGCAAGAAGCTGCACGGCACTGGTGTTACATCAAATAGTTTGGAACCAGGCACTGTA
CAGACCGACGCTTTCAGACATCTGAATACCTATGAATTGCAAACATTCACGGAAAGGTTT
TCATCTTTCATGATGAGAATTGCAAAATGGTTGTTTAAGACTCCAGAAAAAGGGGCTCAA
ACCTCAATATACCTTGCAGTAGCCCCAGAGCTTGCAGAAGACAGTGTAAAGTATTACTAC
GACTGCAAACAGACAGAAGAGTCAGCCGATGCGAAGAATGATCATTTTGCCGAGAGATTG
TGGAAAATCAGTGAAAAATTCGTTGGATTGAAGACAGGAAGCGAGGAAGGAGAAGTAGAG
TGAAAGGAAACA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[21-284] 1.7E-57 |
| Pfam |
SDR_fam (IPR002347) - T[23-163] 2.7E-28 |
| PRINTS |
SDR_fam (IPR002347) - T[24-41] 4.7E-19 - T[100-111] 1.1E-6 - T[100-111] 4.7E-19 - T[145-161] 4.7E-19 - T[151-159] 1.1E-6 - T[187-206] 1.1E-6 - T[187-206] 4.7E-19 - T[208-225] 4.7E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 48.185 % | 253 | 5.13E-83 |
| RDH13_HUMAN | 51.14 % | 268 | 9.57E-89 |
| RDH12_HUMAN | 49 % | 254 | 1.94E-83 |