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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S362.g04574.01.t

Possible name(s)

CTBP1; CTBP2; PHGDH

Gene model

Haaura.CG.MTP2014.S362.g04574

Location

S362 [18,404 / 22,159]

Sequences

Amino acid sequence

Length: 479

>Haaura.CG.MTP2014.S362.g04574.01.p
MAGGRPLVALLDGRDCSVEMPILKDIATVAFCDAQSTQEIHEKVLNEAVGALLSRIALTR
DDLEKFKAVRIIVCIGAGYDNVDIKAAAEMGIAVCNVPSATIDEVADTTMCHILNLYRRV
TWLHEAVKDGRRPQNHENIREMAMGATRIRGETLGIIGLGRTGTAVALRAKAFGFNVLYH
DPFLPDGMGKALGLQEVSTLRDLLYQSDCVTLHCNYTENNNHLINDFTIKQMRQGAFLVN
VAHGSLVDEHSLASALKDGRLRGAALDVQENEPFSFETSPLRDAPNLILTPHAAWYSEKS
WTELREAAAAEIRRGITGRIPDNLRNCVNKEYFPSATSLGSSSLHGTQQPWNLERPPIHS
TGPAPHLNPTGHHETNGNSYRYALPSVIPPPAASAAINDGGAPDGPNRGPLGQIPGAMVM
PNAGRASTSPIVSRQSPLPSVVPVKPDGDVNMKIFAQITRRSQHPFVLLRQTCAFHLI*

Nucleotide sequence

Length: 1,775

>Haaura.CG.MTP2014.S362.g04574.01.t
ATGGCTGGTGGAAGGCCCTTGGTGGCTTTGTTGGATGGCCGAGATTGCAGTGTGGAAATG
CCTATTTTAAAAGATATTGCAACGGTTGCCTTTTGTGATGCACAGTCTACACAAGAAATA
CATGAGAAGGTACTCAACGAAGCCGTTGGTGCCTTACTATCGCGGATCGCGCTCACCAGG
GATGACCTAGAAAAATTTAAAGCTGTTCGAATAATAGTTTGCATTGGTGCTGGCTATGAC
AATGTCGATATCAAAGCTGCAGCTGAGATGGGAATTGCAGTATGCAACGTTCCCTCTGCT
ACCATCGATGAAGTTGCAGACACGACTATGTGTCATATCCTAAATCTATACAGACGAGTC
ACTTGGCTTCATGAGGCGGTGAAAGACGGCAGGAGACCTCAGAATCATGAGAACATAAGA
GAAATGGCCATGGGTGCAACACGAATCCGTGGAGAGACTTTGGGAATTATTGGCTTAGGA
CGAACCGGAACAGCAGTTGCATTGAGAGCAAAAGCGTTTGGATTTAATGTTTTATATCAC
GACCCCTTCCTACCTGATGGAATGGGGAAGGCTCTTGGACTCCAGGAAGTGTCCACTCTG
AGGGATCTGCTATATCAAAGCGACTGTGTGACATTGCACTGCAATTATACAGAGAACAAT
AACCACCTGATAAATGACTTCACAATAAAACAAATGCGACAAGGGGCCTTCCTCGTTAAC
GTAGCTCACGGATCGCTCGTCGATGAACACTCACTAGCTTCTGCTCTCAAAGATGGGAGG
TTGAGAGGAGCCGCTCTAGATGTTCAGGAAAACGAACCGTTCTCTTTTGAAACTTCTCCC
CTGCGTGACGCACCTAACCTCATTCTCACACCACATGCTGCTTGGTACAGTGAAAAGAGC
TGGACAGAATTGAGGGAGGCAGCGGCTGCGGAAATTCGACGAGGCATCACAGGACGAATA
CCTGACAATCTTAGAAATTGCGTCAACAAGGAATATTTTCCCTCAGCTACGAGTCTTGGA
AGCTCTAGTTTACATGGCACTCAACAACCATGGAATCTGGAACGGCCTCCGATTCACTCA
ACAGGTCCAGCACCCCACCTAAATCCAACCGGACATCATGAAACAAACGGTAATTCGTAT
CGCTACGCTCTTCCGTCAGTGATTCCGCCACCTGCTGCCAGTGCGGCAATAAATGATGGA
GGTGCCCCAGACGGGCCTAACAGGGGACCATTAGGGCAGATACCTGGGGCCATGGTGATG
CCTAATGCCGGTAGAGCTAGCACATCCCCTATTGTCTCACGACAATCGCCTCTACCGTCA
GTGGTGCCAGTCAAGCCAGACGGTGATGTGAACATGAAGATCTTTGCCCAGATTACTCGA
CGTTCTCAACATCCCTTTGTTTTGTTAAGGCAAACCTGTGCATTTCATTTGATTTAGACA
TCTGAATTGGGTAGGAATGTTGTTGACACAGCAGGTATCAGTGTTATCCTGGCATTTTTA
TCATTTCCCTCTTAAAGGAAATATGACATGAATAGGACATTAATATTTTTGTTTACTTAT
GCTTAATGGCATAAGTGCTATCATCAGAGTCAACTTTATCTTATCGCTCTTGCAATTTGC
ATTGGGTGATTGAAATACAGGACTTGACATGGTTGTGGATACAATTTTTCCAGTGTGCGT
TACTCTGATTTAACCGTTTCCAAGCTTCAACAGGAACCATTTTTTATATCAAAGAAATGA
CACAATTTTTCCTCATTAATATATTTAGCAATTTC

InterProScan

Pfam
D-isomer_2_OHA_DH_cat_dom (IPR006139) - T[16-324] 1.2E-26
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[104-295] 3.1E-54
Pfam
D-isomer_DH_NAD-bd (IPR006140) - T[111-294] 1.6E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SERA_HUMAN 31.93 % 133 6.73E-34
CTBP1_HUMAN 61.435 % 531 0
CTBP2_HUMAN 65.432 % 530 0