Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S37.g00966.01.t

Possible name(s)

RDH11; RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S37.g00966

Location

S37 [12,900 / 14,927]

Sequences

Amino acid sequence

Length: 330

>Haaura.CG.MTP2014.S37.g00966.01.p
TAFLFPENFKESMANKSSRVTPMDKAKVKSAKGSWVRSDVCLEGKTAIVTGANTGIGLET
ALDLAKRQARIIIACRNVEKGQAARDEICTESGSTEVYFKQLDLSSFGSIRKFADEIHES
EDRLDILINNAGIMMCPKSKTEDGFEMHFGVNHLGHYLLTNLLLDLIKKSAPSRIITLSS
VMHTKRYNAYIHWDDLNFDKSYFPRDAYSQSKLMNVMFSSELSKILTGTGVTTYCVHPGL
VRTNLLQNVGTNASCWDLLFSLATKSTKIFWKTPRHGAQTSIYCAIAPELECETGKYYAD
CKEKSVGRGARDDEAAKKLWQISEQITAVS

Nucleotide sequence

Length: 990

>Haaura.CG.MTP2014.S37.g00966.01.t
ACAGCATTTCTATTTCCAGAGAACTTTAAGGAATCCATGGCTAATAAGAGTTCTCGTGTG
ACTCCGATGGATAAGGCAAAAGTAAAATCAGCTAAAGGTAGTTGGGTAAGAAGCGATGTA
TGTCTAGAAGGAAAGACGGCGATTGTAACTGGAGCAAACACAGGAATCGGTTTGGAAACG
GCTCTGGATTTAGCAAAGCGTCAAGCTAGAATTATAATAGCATGTCGGAACGTAGAAAAA
GGACAAGCAGCTAGAGACGAGATATGCACTGAAAGCGGATCGACCGAAGTTTATTTCAAA
CAACTTGACTTGTCTTCCTTTGGTTCTATTAGAAAGTTTGCTGATGAAATCCACGAATCC
GAGGATAGACTTGATATTCTCATTAATAATGCAGGAATCATGATGTGTCCAAAGTCGAAA
ACAGAAGACGGATTTGAAATGCATTTTGGTGTCAACCATCTTGGACACTATCTTCTTACA
AATCTGTTGCTCGATTTGATAAAGAAAAGCGCCCCGAGTCGTATTATTACGTTGTCGTCT
GTAATGCACACGAAAAGATACAATGCGTACATTCACTGGGACGATCTAAATTTCGATAAG
TCTTATTTCCCAAGAGATGCGTACAGTCAAAGCAAACTGATGAATGTGATGTTTTCTAGT
GAACTGAGCAAAATCTTAACTGGTACTGGTGTAACTACCTACTGCGTACACCCAGGTTTA
GTAAGAACCAATCTTCTACAAAATGTTGGCACCAATGCGTCATGTTGGGACTTGCTCTTC
AGTTTAGCTACAAAATCAACAAAAATATTCTGGAAGACACCGCGTCACGGCGCGCAAACC
TCGATATATTGCGCTATAGCGCCGGAGTTGGAATGTGAGACGGGAAAATATTATGCGGAC
TGCAAAGAAAAATCAGTAGGTCGTGGAGCGAGAGATGACGAGGCAGCGAAAAAATTATGG
CAAATTAGCGAACAAATAACCGCTGTTTCG

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[42-303] 3.69E-58
Pfam	SDR_fam (IPR002347) - T[45-189] 3.7E-26
PRINTS	SDR_fam (IPR002347) - T[46-63] 2.0E-14 - T[122-133] 2.0E-14 - T[122-133] 1.1E-5 - T[167-183] 2.0E-14 - T[173-181] 1.1E-5 - T[208-227] 1.1E-5 - T[229-246] 2.0E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	49.301 %	256	3.03E-84
RDH13_HUMAN	49.169 %	254	2.57E-83
RDH12_HUMAN	48.822 %	265	1.78E-87