- Transcript 'KH2012:KH.C1.263.v1....' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S397.g04810.01.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S397 [12,202 / 23,717]
Amino acid sequence
Length: 705
>Haaura.CG.MTP2014.S397.g04810.01.p
MNYSVADMEVRDFLGNGQNGVLNNDEQMSESKSGYTMPGILHFIQHEWSRFEMDRAQWEV
ERAELQARIAFLQGERKGQENLKRDLVRRIKMLEFALKQERAKLQQYKFGTDYTNEQKSS
ESTDLKINEELPPTNSQMSWRQGRQLLRQYLQEVGYSDTILDVRSQRVRALLGKSYDATS
PSFSAEKDGRILNGMSENEENMQAVDSSHPGKEPTEVDVMTNFDFLSGSLSDDRDEEMED
AEDDDEVDGGGDQQRKPRSKNIDDDENFLEMDAAVDDVTDTDSALAEFDFLSATDDDDIT
DPRVTDWQVDRNKLNAKKEKFKEEKKHSKKKGLNRPDKKDLQNMLETLRGSSGIPPIDIE
SNRNEEDSLPFTVGGTRSNVMGEDAMDSALRLGELAGLTVTNEADPLTYDVSSTKDSFRK
TWTPKFTLRSHLDGIRCVAFLPADPAVITASEDNTLKLWNLSKTVPSKKSQALDVEPIYS
FRGHIGSVLSLAIDCEGVVCYSGGVDSSIRMWNIPSRHIDPYDTYVSSVTGKVLVGHTDS
VWSLSYSGTRHHLLSASADTTVRLWDPQSSDPLIRTFAAPGGSTPTSVQFVCCDSGQAVV
SHSDGKILIYDLETGQIPAMLADSDDCLVSYVVSHPTMPVTISAHDDRHIRFYDNNSGKM
IHSMVAHLDAVTSLAVDPNGLYLLSGSMFSTSIYFTLEIYIGKP*
Nucleotide sequence
Length: 2,115
>Haaura.CG.MTP2014.S397.g04810.01.t
ATGAATTATTCCGTCGCTGACATGGAGGTCCGAGATTTTTTAGGGAATGGTCAGAATGGT
GTGCTGAATAATGACGAACAAATGAGCGAATCCAAATCGGGATACACCATGCCCGGGATT
CTACACTTCATCCAACACGAATGGTCACGTTTTGAAATGGACAGGGCGCAATGGGAAGTT
GAGAGAGCTGAACTACAGGCCCGTATCGCTTTTCTACAAGGTGAAAGGAAAGGCCAGGAA
AATCTGAAACGCGATCTGGTTCGACGTATTAAAATGCTTGAATTCGCACTAAAGCAAGAA
AGAGCAAAACTGCAGCAGTACAAGTTTGGTACTGATTACACCAACGAACAAAAGTCTAGC
GAATCGACTGACTTGAAAATCAATGAAGAACTGCCACCGACAAATTCTCAAATGTCTTGG
AGGCAAGGAAGACAGTTGCTTAGACAATATCTTCAGGAGGTCGGATATAGCGACACTATT
CTGGACGTGAGATCACAGAGAGTCCGAGCTCTCTTAGGCAAAAGCTATGATGCGACATCA
CCATCTTTCTCTGCAGAAAAAGACGGACGCATCTTGAACGGGATGTCAGAAAATGAAGAA
AACATGCAGGCTGTTGATTCGTCTCATCCCGGCAAGGAGCCGACGGAAGTCGATGTCATG
ACCAACTTTGATTTTCTGAGCGGATCTTTGAGCGACGATAGAGATGAAGAGATGGAAGAT
GCAGAGGACGACGATGAGGTGGACGGAGGAGGCGACCAACAAAGAAAGCCAAGATCAAAA
AATATTGATGATGACGAAAACTTCTTGGAAATGGATGCCGCCGTAGACGATGTAACCGAC
ACGGATTCTGCCTTGGCAGAATTCGATTTCCTTTCGGCCACCGATGATGATGATATAACT
GACCCGAGAGTAACGGATTGGCAAGTTGATCGAAATAAACTCAACGCCAAGAAGGAGAAA
TTTAAAGAGGAAAAAAAGCACTCGAAAAAGAAAGGACTCAATCGTCCAGACAAAAAAGAT
TTACAGAACATGCTGGAAACGTTAAGAGGATCTAGCGGGATTCCTCCAATTGATATTGAG
AGTAATAGAAATGAAGAAGATAGCCTACCATTCACCGTTGGTGGAACACGTAGTAATGTT
ATGGGTGAAGATGCAATGGACAGTGCACTAAGATTGGGTGAGCTTGCCGGACTTACAGTG
ACCAATGAGGCTGATCCATTAACGTATGATGTCTCTTCCACTAAAGATTCCTTCAGAAAA
ACCTGGACACCAAAGTTTACTTTACGAAGTCACCTCGATGGCATACGTTGTGTGGCTTTT
TTGCCTGCTGACCCGGCCGTCATCACTGCCTCGGAGGACAACACGCTGAAACTATGGAAC
TTAAGCAAGACCGTCCCGAGCAAAAAATCTCAAGCGCTAGACGTCGAGCCGATTTACAGT
TTCCGGGGACACATAGGTTCTGTTCTCTCATTGGCCATTGACTGTGAGGGCGTCGTTTGC
TACAGCGGTGGTGTCGATTCAAGCATTCGAATGTGGAACATTCCCAGTCGTCACATCGAC
CCATATGACACCTATGTTTCTTCTGTCACTGGAAAAGTCCTTGTGGGACATACCGACTCA
GTTTGGAGCTTGTCGTATAGCGGCACCCGACATCATTTGTTGTCTGCCTCTGCTGACACC
ACAGTTCGCCTCTGGGATCCACAATCTTCAGATCCATTGATAAGAACATTTGCTGCTCCA
GGTGGCTCAACCCCTACATCGGTCCAGTTCGTCTGTTGTGATTCTGGGCAGGCAGTTGTG
TCTCATTCAGACGGTAAAATCCTCATCTATGATCTGGAGACGGGACAGATTCCTGCCATG
CTTGCTGATTCTGATGACTGTCTTGTCAGCTATGTCGTTAGCCACCCGACGATGCCTGTC
ACAATATCTGCCCATGACGATAGACACATACGGTTCTATGACAATAATTCTGGAAAAATG
ATTCATTCTATGGTGGCCCATCTCGACGCTGTGACAAGTTTGGCTGTTGACCCAAATGGT
CTTTATTTACTATCAGGAAGTATGTTTTCGACATCAATATATTTTACTCTTGAGATTTAC
ATTGGCAAACCTTGA
| Pfam |
Striatin_N (IPR013258) - T[36-162] 4.5E-45 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[399-519] 2.1E-18 - T[520-695] 1.6E-30 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[420-690] 9.16E-49 |
| SMART |
WD40_repeat (IPR001680) - T[421-460] 6.8E-8 - T[474-513] 9.7E-6 - T[527-566] 2.6E-7 - T[570-611] 5.2 - T[614-654] 34.0 - T[657-697] 0.68 |
| Pfam |
WD40_repeat (IPR001680) - T[423-460] 5.0E-5 - T[476-513] 2.9E-4 - T[532-566] 5.5E-5 - T[659-688] 0.014 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[428-462] 13.483 - T[481-514] 11.077 - T[534-575] 14.786 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[428-687] 30.664 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[447-461] . - T[500-514] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[447-461] 9.7E-6 - T[500-514] 9.7E-6 - T[553-567] 9.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 51 % | 641 | 0 |
| STRN_HUMAN | 48.784 % | 605 | 0 |
| STRN4_HUMAN | 45.508 % | 509 | 1.85E-171 |