- Transcript 'KH2012:KH.C5.500.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S397.g04810.02.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S397 [12,202 / 23,905]
Amino acid sequence
Length: 607
>Haaura.CG.MTP2014.S397.g04810.02.p
MNYSVADMEVRDFLGNGQNGVLNNDEQMSESKSGYTMPGILHFIQHEWSRFEMDRAQWEV
ERAELQARIAFLQGERKGQENLKRDLVRRIKMLEFALKQERAKLQQYKFGTDYTNEQKSS
ESTDLKINEELPPTNSQMSWRQGRQLLRQYLQEVGYSDTILDVRSQRVRALLGKSYDATS
PSFSAEKDGRILNGMSENEENMQAVDSSHPGKEPTEVDVMTNFDFLSGSLSDDRDEEMED
AEDDDEVDGGGDQQRKPRSKNVTDPRVTDWQVDRNKLNAKKEKFKEEKKHSKKKGLNRPD
KKDLQNMLETLRGSSGIPPIDIESNRNEEDSLPFTVGGTRSNVMGEDAMDSALRLGELAG
LTVTNEADPLTYDVSSTKDSFRKTWTPKFTLRSHLDGIRCVAFLPADPAVITASEDNTLK
LWNLSKTVPSKKSQALDVEPIYSFRGHIPTSVQFVCCDSGQAVVSHSDGKILIYDLETGQ
IPAMLADSDDCLVSYVVSHPTMPVTISAHDDRHIRFYDNNSGKMIHSMVAHLDAVTSLAV
DPNGLYLLSGSHDCSIRLWNLDSKTCVQEITAHRKKFDESIFSVAFHPSASYIASAGADA
LAKVFV*
Nucleotide sequence
Length: 1,821
>Haaura.CG.MTP2014.S397.g04810.02.t
ATGAATTATTCCGTCGCTGACATGGAGGTCCGAGATTTTTTAGGGAATGGTCAGAATGGT
GTGCTGAATAATGACGAACAAATGAGCGAATCCAAATCGGGATACACCATGCCCGGGATT
CTACACTTCATCCAACACGAATGGTCACGTTTTGAAATGGACAGGGCGCAATGGGAAGTT
GAGAGAGCTGAACTACAGGCCCGTATCGCTTTTCTACAAGGTGAAAGGAAAGGCCAGGAA
AATCTGAAACGCGATCTGGTTCGACGTATTAAAATGCTTGAATTCGCACTAAAGCAAGAA
AGAGCAAAACTGCAGCAGTACAAGTTTGGTACTGATTACACCAACGAACAAAAGTCTAGC
GAATCGACTGACTTGAAAATCAATGAAGAACTGCCACCGACAAATTCTCAAATGTCTTGG
AGGCAAGGAAGACAGTTGCTTAGACAATATCTTCAGGAGGTCGGATATAGCGACACTATT
CTGGACGTGAGATCACAGAGAGTCCGAGCTCTCTTAGGCAAAAGCTATGATGCGACATCA
CCATCTTTCTCTGCAGAAAAAGACGGACGCATCTTGAACGGGATGTCAGAAAATGAAGAA
AACATGCAGGCTGTTGATTCGTCTCATCCCGGCAAGGAGCCGACGGAAGTCGATGTCATG
ACCAACTTTGATTTTCTGAGCGGATCTTTGAGCGACGATAGAGATGAAGAGATGGAAGAT
GCAGAGGACGACGATGAGGTGGACGGAGGAGGCGACCAACAAAGAAAGCCAAGATCAAAA
AATGTAACTGACCCGAGAGTAACGGATTGGCAAGTTGATCGAAATAAACTCAACGCCAAG
AAGGAGAAATTTAAAGAGGAAAAAAAGCACTCGAAAAAGAAAGGACTCAATCGTCCAGAC
AAAAAAGATTTACAGAACATGCTGGAAACGTTAAGAGGATCTAGCGGGATTCCTCCAATT
GATATTGAGAGTAATAGAAATGAAGAAGATAGCCTACCATTCACCGTTGGTGGAACACGT
AGTAATGTTATGGGTGAAGATGCAATGGACAGTGCACTAAGATTGGGTGAGCTTGCCGGA
CTTACAGTGACCAATGAGGCTGATCCATTAACGTATGATGTCTCTTCCACTAAAGATTCC
TTCAGAAAAACCTGGACACCAAAGTTTACTTTACGAAGTCACCTCGATGGCATACGTTGT
GTGGCTTTTTTGCCTGCTGACCCGGCCGTCATCACTGCCTCGGAGGACAACACGCTGAAA
CTATGGAACTTAAGCAAGACCGTCCCGAGCAAAAAATCTCAAGCGCTAGACGTCGAGCCG
ATTTACAGTTTCCGGGGACACATCCCTACATCGGTCCAGTTCGTCTGTTGTGATTCTGGG
CAGGCAGTTGTGTCTCATTCAGACGGTAAAATCCTCATCTATGATCTGGAGACGGGACAG
ATTCCTGCCATGCTTGCTGATTCTGATGACTGTCTTGTCAGCTATGTCGTTAGCCACCCG
ACGATGCCTGTCACAATATCTGCCCATGACGATAGACACATACGGTTCTATGACAATAAT
TCTGGAAAAATGATTCATTCTATGGTGGCCCATCTCGACGCTGTGACAAGTTTGGCTGTT
GACCCAAATGGTCTTTATTTACTATCAGGAAGCCATGATTGTTCTATCCGTCTTTGGAAT
CTGGACAGCAAAACCTGCGTACAGGAAATTACAGCTCATAGGAAAAAATTTGACGAATCC
ATATTCTCTGTTGCTTTCCATCCCTCGGCTTCGTATATCGCCAGCGCGGGTGCCGACGCT
CTGGCCAAAGTATTTGTGTGA
| Pfam |
Striatin_N (IPR013258) - T[36-162] 3.8E-45 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[370-452] 1.7E-8 - T[453-605] 7.8E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[384-604] 1.01E-43 |
| SMART |
WD40_repeat (IPR001680) - T[384-423] 6.8E-8 - T[437-475] 1.9 - T[478-518] 34.0 - T[521-560] 6.1E-10 - T[563-606] 2.1E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[386-423] 4.2E-5 - T[439-475] 0.24 - T[523-560] 3.9E-8 - T[565-600] 0.024 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[391-606] 28.924 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[391-425] 13.483 - T[528-569] 15.688 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[410-424] . - T[547-561] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 41.531 % | 395 | 5.19E-128 |
| STRN_HUMAN | 41.723 % | 399 | 5.72E-130 |
| STRN4_HUMAN | 38.38 % | 317 | 7.34E-99 |