- Transcript 'Cisavi.CG.ENS81.R132...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S398.g04814.01.t
Possible name(s)
DYSF; FER1L6; OTOF
Gene model
Location
S398 [424 / 5,149]
Amino acid sequence
Length: 534
>Haaura.CG.MTP2014.S398.g04814.01.p
VGRRLLKGAVGAVKIAKRGLANPIRKRKNTKQPIDELQLYDTELENISDYTGFHDLLHSF
DLYRGKREDDADDLVDQKRIVGSFKGAFKIYRSPLGDWVEQPDPILGMFKGLPSNEPIHV
MVRVYVVRANDLHPTDPNGKADPYLMVALGNQKVNDKENYVSKQLNPMFGKTFEFEATFP
MESVLTVQVYDWDLLSADDLIGETKIDLENRFYSKHRATCGIAEKYSIFGYNQWRDPQKP
SQVLTKLCKDYKIEGPVFSPGKVKIGKKFYAGPVELEDENGHKKATDEHVALVALRSWNE
IPKVGCPLVPEHVETRSIFSPEKPGIEQGRLELWVDMFPMDMPLPGTAVDISPRKPKGYE
IRVIIWNTDEVVCEDDDFFTGEKMSDIYVKGWLLGDDKQETDIHYRSLTGEGNFNWRFIY
PFNYLIAEEKIVVTKKESVFSWDETEFKIPPRLNLQVWDADHFSADDFLGSLTLDLTHFP
RGAKSASKCSLNMATEEDEALSSNVPMISLFKQRRIKGWWPFTAKNDQDELEIT
Nucleotide sequence
Length: 1,602
>Haaura.CG.MTP2014.S398.g04814.01.t
GTGGGACGTCGCTTACTGAAAGGAGCAGTTGGAGCAGTTAAAATCGCAAAACGTGGACTC
GCTAATCCGATAAGAAAAAGAAAAAATACAAAGCAACCAATCGATGAACTGCAGCTGTAT
GATACTGAGCTTGAAAATATTTCCGACTACACTGGTTTCCACGATCTTTTACATTCGTTC
GATCTCTATCGTGGAAAGAGAGAAGATGACGCTGATGATCTTGTCGATCAGAAAAGAATT
GTTGGGTCTTTCAAGGGAGCTTTCAAGATTTACAGATCACCCCTGGGTGATTGGGTGGAA
CAACCTGACCCCATTCTCGGAATGTTCAAGGGTTTACCCAGCAATGAACCCATTCACGTC
ATGGTTCGTGTGTATGTTGTTCGTGCCAACGATCTTCACCCCACTGACCCCAATGGGAAA
GCTGACCCTTATTTGATGGTGGCATTAGGGAACCAGAAAGTGAATGATAAGGAAAATTAT
GTTTCAAAGCAGCTCAATCCAATGTTTGGAAAAACATTTGAATTTGAGGCAACATTCCCG
ATGGAAAGCGTTCTGACAGTTCAAGTTTACGACTGGGATTTGCTCAGCGCTGATGATTTG
ATCGGAGAAACAAAGATAGATCTCGAGAATAGATTTTACAGCAAACACAGAGCAACATGT
GGAATAGCTGAAAAATATAGCATTTTCGGATACAACCAGTGGAGGGATCCTCAGAAACCG
AGTCAAGTTTTGACGAAACTCTGCAAAGATTACAAGATCGAAGGTCCAGTGTTCTCTCCC
GGAAAAGTTAAAATTGGCAAGAAGTTTTACGCTGGACCAGTTGAACTAGAAGATGAAAAT
GGCCACAAGAAAGCAACAGACGAACATGTTGCCCTTGTTGCTCTAAGAAGCTGGAATGAA
ATCCCAAAAGTCGGATGTCCACTTGTTCCGGAACATGTCGAGACTAGGTCGATATTCAGC
CCAGAAAAACCGGGAATCGAACAGGGACGTCTCGAACTTTGGGTCGATATGTTTCCAATG
GACATGCCGCTACCAGGAACTGCTGTTGATATTTCTCCAAGGAAACCAAAAGGATATGAA
ATCCGTGTCATTATATGGAACACAGACGAGGTTGTTTGTGAGGACGATGATTTTTTCACG
GGCGAGAAAATGTCTGATATTTATGTGAAAGGATGGCTACTTGGCGACGACAAACAAGAG
ACCGATATTCATTACAGATCATTGACTGGTGAAGGAAATTTCAACTGGAGATTTATTTAT
CCATTTAATTATCTCATAGCTGAAGAAAAGATTGTTGTGACAAAGAAAGAATCTGTCTTC
TCTTGGGATGAAACCGAATTCAAAATTCCTCCTCGGCTCAACCTCCAAGTATGGGATGCG
GATCATTTCTCTGCTGATGATTTCCTGGGTTCATTGACCCTTGACCTCACCCATTTCCCC
CGGGGAGCAAAGTCAGCATCGAAATGCAGCTTGAACATGGCAACTGAAGAAGATGAAGCG
TTGTCGAGCAATGTTCCAATGATTTCACTGTTCAAACAGCGAAGGATCAAGGGATGGTGG
CCGTTTACTGCAAAGAATGATCAAGATGAACTGGAAATTACC
| PANTHER |
Ferlin (IPR037721) - T[21-534] 1.4E-258 |
| PANTHER |
Otoferlin (IPR029996) - T[21-534] 1.4E-258 |
| Gene3D |
C2_domain_sf (IPR035892) - T[120-236] 1.4E-24 - T[341-495] 1.2E-17 |
| SMART |
C2_dom (IPR000008) - T[121-220] 1.6E-11 - T[365-488] 13.0 |
| CDD |
C2E_Ferlin (IPR037724) - T[122-244] 5.66224E-72 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[122-205] 14.734 |
| Pfam |
C2_dom (IPR000008) - T[122-212] 1.8E-19 - T[442-483] 9.8E-4 |
| PRINTS |
C2_dom (IPR000008) - T[137-149] 5.6E-7 - T[163-176] 5.6E-7 - T[185-193] 5.6E-7 |
| CDD |
C2F_Ferlin (IPR037725) - T[360-491] 3.38813E-78 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTOF_HUMAN | 66.471 % | 728 | 0 |
| FR1L6_HUMAN | 54.158 % | 573 | 0 |
| FR1L4_HUMAN | 44.681 % | 456 | 6.91E-145 |