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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4011.g10521.01.t

Possible name(s)

TRMT1L

Location

S4011 [5,406 / 6,090]

Sequences

Amino acid sequence

Length: 228

>Haaura.CG.MTP2014.S4011.g10521.01.p
VVIVKVLKGSKHADMSLQSITKLAHCRVCNYRQLLPEKLYFSQNNNNLKCVCMAEGIDDK
NVAAPILMLGPVSSQPIFNTKFLVYLYKIHCSLDSESKLVSLLLNMILESICFNSIASEN
DWRNILTKILESTKKEGPSPPKKGKIEDDLEDLLNDVGDVDFPPFYYTVRNHAVKGLNPC
RMNIILQELRENGFRACKTVFDPTAIRTSATTSEFKKTIEKTSLTPS*

Nucleotide sequence

Length: 684

>Haaura.CG.MTP2014.S4011.g10521.01.t
GTGGTGATTGTCAAAGTTTTGAAAGGTTCCAAACATGCTGATATGTCTTTGCAATCAATA
ACAAAACTGGCGCACTGCAGGGTTTGCAATTATCGCCAGTTACTTCCAGAGAAGCTATAC
TTCTCGCAAAACAATAATAACTTGAAGTGTGTTTGTATGGCGGAAGGCATCGATGACAAA
AATGTTGCGGCGCCTATTTTGATGCTTGGTCCAGTTTCATCACAGCCTATTTTCAACACA
AAGTTTCTTGTTTATCTTTACAAGATCCATTGCTCTCTCGACTCGGAATCAAAACTCGTC
AGCCTGCTTTTGAACATGATTCTTGAAAGCATTTGTTTCAATTCGATCGCTTCGGAAAAT
GACTGGAGAAATATACTCACGAAAATCTTGGAATCGACGAAGAAAGAAGGACCATCACCT
CCCAAAAAGGGTAAAATTGAAGACGACCTTGAAGACTTGCTAAATGATGTCGGAGATGTA
GATTTTCCGCCCTTTTATTACACTGTGCGGAATCATGCAGTGAAAGGGCTAAACCCTTGT
AGAATGAACATCATTCTCCAGGAGTTGCGTGAGAACGGCTTTCGTGCTTGCAAGACAGTT
TTCGATCCAACGGCGATCAGGACTTCAGCCACTACGTCAGAGTTCAAAAAAACAATTGAG
AAGACTAGTTTGACTCCTAGCTAG

InterProScan

ProSiteProfiles
Trm1 (IPR002905) - T[1-219] 20.327
PANTHER
Trm1 (IPR002905) - T[2-223] 5.3E-37
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[2-110] 1.4E-11 - T[160-219] 1.4E-11
Pfam
Trm1 (IPR002905) - T[125-218] 2.7E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value