- Clone 'cima863984' >
- Clone 'cilv022o13' >
- Transcript 'KH2012:KH.L106.19.v1...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S40.g01061.01.t
Possible name(s)
FUCA1; FUCA2
Gene model
Location
S40 [113,842 / 116,189]
Amino acid sequence
Length: 457
>Haaura.CG.MTP2014.S40.g01061.01.p
MQYILFLCMICCLINIGSPAPQKYSATWESLDTRPLPPWYDEAKFGIFIHWGVFSVPSYV
DEWFWSYWKGPNPNKKVVEYMEKNYPPEFTYPDFAKSFKAELYDPNYWADLIAESGAKYV
VLTSKHHEGFTNWGSKYSWNWNAVDVGPNKDLVGLLAQAIRNRTDVRFGLYHSLFEWFNP
LYLEDKASNFTQRKFVLEKTMPELYEIVKKYKPEVIWSDGNSGPEDYWKSPEFIAWLYNE
SPVKDTVVVNDRWDPGAVCKHGDFWTCQDRYSPSKLQNHKWENCMTIDKYSWGFRREANI
ADYLTIEEILKTLATSMAYGGNMLMNIGPCSDGTIASVFQERLKQIGSWLKVNGEAVYSS
APYKRSQNDTINPDVYYTTKASNIYAFLLKWPKDNVVTLGVPLAKGSTSRINMLGVTHEL
DWVYTKQSGLKITLPTLNPEQMPCQWAWVLKFTEFY*
Nucleotide sequence
Length: 1,542
>Haaura.CG.MTP2014.S40.g01061.01.t
ATGTATGATGTAGTGTATCGTAATCAAATATTACTAAATTTTTCTTCTGTATATACAAGT
CCATGCCTGTTTAATATCATGAATGTTACAGCCTAATCAAATTCTTTTAATGTTGCTGTT
GACTCTCATACAATAAACTTTTGATTTTACAGATAATCATTAGATATTAAAATGCAGTAC
ATCCTGTTTCTCTGCATGATTTGTTGCTTGATCAATATTGGTTCGCCTGCACCACAAAAA
TACAGCGCAACATGGGAATCGTTAGACACCAGACCCCTCCCTCCTTGGTACGACGAAGCA
AAATTTGGGATTTTCATACACTGGGGAGTGTTCTCAGTACCAAGCTACGTTGACGAGTGG
TTTTGGTCGTACTGGAAGGGACCAAATCCCAACAAGAAAGTGGTCGAATACATGGAGAAA
AATTATCCGCCGGAATTCACCTACCCTGACTTTGCAAAATCATTCAAGGCTGAGCTCTAT
GATCCCAATTATTGGGCAGACTTAATAGCAGAATCTGGAGCAAAATATGTAGTTCTAACA
AGCAAGCATCATGAAGGCTTTACAAATTGGGGATCAAAATACTCTTGGAATTGGAACGCG
GTGGATGTGGGGCCCAACAAAGACCTGGTTGGACTACTGGCACAAGCAATTCGAAACAGA
ACAGACGTCCGGTTTGGACTTTACCACTCGCTATTTGAATGGTTCAACCCATTATACTTG
GAAGACAAGGCAAGCAATTTCACCCAGAGGAAGTTTGTGTTAGAAAAAACGATGCCGGAG
CTGTACGAAATCGTGAAGAAATACAAACCAGAAGTTATTTGGTCTGATGGAAACAGTGGC
CCCGAAGATTACTGGAAATCCCCAGAATTCATTGCTTGGCTCTACAATGAAAGTCCGGTG
AAGGATACGGTTGTAGTAAATGACAGGTGGGACCCAGGAGCTGTGTGTAAGCATGGTGAT
TTCTGGACCTGCCAGGATAGATATTCACCAAGCAAGTTGCAAAATCACAAATGGGAAAAC
TGCATGACTATCGACAAGTATTCGTGGGGGTTCAGACGGGAAGCAAACATCGCAGACTAT
CTGACGATTGAAGAGATTTTGAAGACCTTAGCGACATCAATGGCATATGGCGGTAACATG
CTGATGAATATCGGACCGTGCAGCGATGGAACAATAGCGAGTGTGTTTCAAGAACGTCTC
AAACAAATTGGATCGTGGCTCAAAGTCAATGGCGAAGCGGTGTATTCAAGCGCTCCATAC
AAGAGATCACAGAATGACACTATAAATCCTGACGTCTATTACACAACAAAAGCTTCTAAT
ATCTATGCATTCCTTTTGAAATGGCCTAAAGATAATGTGGTCACATTGGGTGTACCTTTA
GCTAAGGGTTCTACCAGTAGAATTAACATGCTTGGGGTTACACATGAGTTAGACTGGGTT
TATACAAAACAGTCTGGATTGAAAATAACCCTTCCGACTCTAAATCCAGAGCAAATGCCT
TGTCAGTGGGCTTGGGTGCTGAAATTTACTGAGTTCTATTAA
| PIRSF |
FUC_metazoa-typ (IPR016286) - T[4-452] 4.4E-121 |
| PANTHER |
Glyco_hydro_29 (IPR000933) - T[7-454] 7.6E-207 |
| Pfam |
Glyco_hydro_29 (IPR000933) - T[20-355] 1.9E-115 |
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[23-358] 4.63E-111 |
| SMART |
Glyco_hydro_29 (IPR000933) - T[23-402] 8.0E-216 |
| PRINTS |
FUC_metazoa-typ (IPR016286) - T[80-95] 7.8E-60 - T[119-135] 7.8E-60 - T[166-185] 7.8E-60 - T[206-222] 7.8E-60 - T[233-254] 7.8E-60 - T[308-329] 7.8E-60 - T[341-363] 7.8E-60 |
| ProSitePatterns |
Glyco_hydro_29_CS (IPR018526) - T[273-284] . |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[360-455] 1.3E-10 |
| Pfam |
Fucosidase_C (IPR031919) - T[367-453] 2.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUCO2_HUMAN | 59.447 % | 553 | 0 |
| FUCO_HUMAN | 51.843 % | 480 | 8.42E-168 |