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  1. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S40.g01063.01.t

Possible name(s)

RDH13; RDH14

Location

S40 [124,780 / 126,494]

Sequences

Amino acid sequence

Length: 329

>Haaura.CG.MTP2014.S40.g01063.01.p
MTKALHVSARNGRVIKDISMTSQIVLITGANTGIGYETVKDLTRRGARVIMACRDMKKCE
DAKQRILQSNSGAELSMVELDLASLESVRQCAKKILETESKLDVLINNAGIMLCPMWKTK
DNFEMQLGVNHLGHFLLTNLLLDLIKKSDHGRIVVVSSSAHYGGKMNWDDLMNEKDYHSF
RVYQQSKLANVLFSRELSKQLLGTGITVNSLHPGLVYTELGRHMFNTSSFWDRLRYAIAS
PIVKLVFKTPLQGAQTSIYCAVAPELEEVTGKFFADCKVKEESAAAQSDEDAKRLWDISL
NLTGLQISLMQASPLTPLLRICQYSVSI*

Nucleotide sequence

Length: 1,174

>Haaura.CG.MTP2014.S40.g01063.01.t
ATGACAAAAGCCTTACATGTAAGTGCTAGAAACGGAAGAGTTATTAAAGACATTAGCATG
ACATCGCAAATCGTGTTGATAACTGGTGCCAACACTGGAATAGGATACGAAACGGTAAAA
GATCTGACGCGAAGAGGAGCAAGGGTGATAATGGCTTGCCGAGATATGAAAAAGTGTGAA
GATGCTAAGCAAAGAATATTGCAAAGCAACAGTGGAGCCGAGTTGAGTATGGTAGAGCTT
GATCTTGCATCCCTTGAATCTGTTAGGCAGTGTGCTAAGAAAATTCTAGAAACAGAAAGC
AAGCTTGATGTGTTGATCAACAATGCAGGTATAATGTTATGTCCTATGTGGAAGACAAAA
GACAATTTTGAGATGCAACTAGGAGTGAATCACCTAGGACACTTTCTCTTAACAAATTTA
CTGCTAGATTTGATCAAAAAAAGTGACCACGGCAGAATTGTTGTCGTATCCTCGAGTGCG
CACTACGGTGGTAAGATGAACTGGGATGATTTGATGAATGAGAAGGATTATCATTCGTTC
CGAGTTTATCAGCAAAGCAAACTTGCGAATGTATTGTTTTCGAGAGAGCTTAGTAAACAA
TTGTTGGGTACTGGCATCACAGTTAACAGTTTACATCCTGGTTTGGTATATACTGAACTT
GGAAGGCATATGTTTAATACCAGCTCCTTCTGGGACAGACTACGATATGCTATTGCATCC
CCTATTGTTAAACTTGTATTCAAAACGCCTCTGCAAGGAGCGCAGACATCTATTTATTGC
GCAGTTGCTCCAGAGCTGGAAGAAGTCACTGGAAAGTTTTTCGCTGACTGCAAAGTAAAA
GAAGAGTCGGCAGCAGCCCAAAGTGATGAAGATGCGAAGCGATTGTGGGACATCAGTCTT
AATTTGACTGGATTGCAAATTTCACTTATGCAAGCTTCACCGCTCACTCCACTACTACGT
ATATGTCAGTACAGTGTCTCGATTTAAAAGTTTGCTGGTTCCCTCGCTTACTTCAGACAC
ATTTTATTCCTGTACTTTTTTTATTTTTTCTGAATTCTAATTATATTACCTTGATGTTTC
ATATTGGTTTTATACCACAAAGTTCAAGACACAAACATTCCACTAAAATATTTCAACAAC
TTATATCCTATATATATTGCATTATCAAATCATT

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[19-279] 5.07E-63
Pfam
SDR_fam (IPR002347) - T[23-223] 5.1E-35
PRINTS
SDR_fam (IPR002347) - T[24-41] 3.2E-21 - T[100-111] 3.2E-21 - T[100-111] 1.1E-6 - T[145-161] 3.2E-21 - T[151-159] 1.1E-6 - T[183-202] 3.2E-21 - T[183-202] 1.1E-6 - T[204-221] 3.2E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 46.465 % 253 8.01E-83
RDH13_HUMAN 48.829 % 266 5.83E-88
RDH14_HUMAN 50.495 % 263 1.04E-86





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