- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S422.g04967.01.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
S422 [29,631 / 38,873]
Amino acid sequence
Length: 667
>Haaura.CG.MTP2014.S422.g04967.01.p
HKNLILFSEEPGAKKLASQNDSIGSQLGNMQNQIPGGRPTITESFRLPDKLVGLVIGKGG
ENISRMQEQSGCRIQISQDCQGGEDRPCTLTGTPEEIGQCREMLQDTISKAAGNMGVGMP
AGLEEPLMGAQTVIQLMIPPDKCGLIIGKGGETIKAIQQNIGVKMMLIQDTTQNTGMDKP
LRISGEPMKVEQAKQHIEQIMAQRDLQQQQQQMQRGGGGGGGGGGGGGNGGGGGRMNFPS
GPQKLIPVPKPAVGVVIGKGGDMITRIQNETGTRVQFKQEEEDPNVPHRMCTITGPHENI
QKAIEKIQELIQSVRDHDNSGMGGGQGDGSRGRNRPGGSFGQWEGGPGGMVRGRSGPGMN
TVEYNVPTNKTGLVIGKGGENIRQINQQSQAHVEIQRNPPPGSDQMYKTFIIKGTPEQIA
LAQQLIQEKVEGGPGGGGNHGHGGPGHGGGMGIMGHGPPGAHHGPGPGGPGGYGPPPPQN
NFGAPPPGPGGFGGPPQGPPQQAQPPQQFQNQQPWAGAPNQYQWPQPGGPQQNGAIPQDP
NKPPDSNAAAWANYYNYYQNQGQQPAAAAAAVAAAYPQQAAAAPGTVVQAQTAAGQPDYT
KAWEEYYKKQAEAAAPAAVNPAAASQAGGADYSAAWAEYYRQYAQYYQQSQAQQQYSTAP
AAPAQQ*
Nucleotide sequence
Length: 2,001
>Haaura.CG.MTP2014.S422.g04967.01.t
CACAAAAATCTCATTTTATTTTCAGAAGAACCTGGTGCAAAAAAATTAGCTTCACAGAAT
GATTCAATTGGTTCTCAATTAGGAAATATGCAGAACCAAATACCAGGTGGAAGACCCACC
ATTACAGAAAGCTTTAGATTGCCGGACAAACTAGTCGGTTTGGTTATAGGGAAAGGTGGC
GAGAACATTAGTAGAATGCAAGAACAAAGTGGATGTCGTATCCAGATATCGCAAGATTGT
CAAGGAGGCGAAGACAGGCCATGCACATTGACAGGAACGCCAGAAGAAATAGGTCAATGT
CGTGAAATGTTGCAAGACACCATCAGCAAAGCAGCGGGTAATATGGGTGTCGGCATGCCC
GCAGGCTTAGAAGAACCATTGATGGGTGCTCAGACCGTCATACAGCTCATGATTCCTCCC
GATAAATGCGGGCTGATCATCGGCAAAGGAGGAGAAACTATTAAAGCGATCCAGCAGAAC
ATTGGAGTGAAAATGATGTTGATCCAAGACACCACACAGAATACAGGGATGGATAAACCG
CTGAGAATTAGCGGAGAACCGATGAAAGTTGAGCAAGCCAAGCAACATATCGAACAGATC
ATGGCTCAGCGTGATTTGCAGCAACAGCAACAACAGATGCAGAGAGGTGGAGGTGGGGGA
GGAGGAGGAGGTGGTGGTGGCGGGAACGGCGGAGGAGGAGGAAGAATGAATTTCCCGTCT
GGACCCCAGAAACTGATCCCCGTCCCTAAACCTGCAGTCGGAGTTGTCATCGGCAAAGGC
GGAGACATGATAACTCGAATCCAGAATGAAACTGGAACGAGGGTGCAGTTTAAACAGGAA
GAAGAAGATCCAAACGTGCCTCACCGTATGTGTACGATCACCGGTCCGCATGAAAATATC
CAGAAAGCGATCGAAAAAATTCAAGAACTCATCCAGAGCGTTCGTGATCATGATAATTCC
GGAATGGGAGGCGGTCAAGGAGATGGTTCCAGAGGTCGCAACCGTCCCGGTGGCAGTTTC
GGACAGTGGGAAGGAGGACCAGGTGGCATGGTGCGCGGTCGTTCCGGACCCGGGATGAAC
ACTGTTGAATATAATGTGCCGACAAACAAAACCGGTCTTGTGATTGGAAAAGGTGGTGAA
AATATCCGTCAAATTAATCAACAGTCTCAAGCTCATGTTGAAATACAAAGAAATCCACCA
CCAGGAAGCGATCAAATGTATAAAACATTTATTATCAAAGGTACGCCGGAACAGATTGCA
CTAGCTCAGCAACTCATTCAAGAAAAAGTTGAGGGCGGTCCCGGAGGCGGTGGTAACCAT
GGACATGGAGGGCCAGGCCACGGTGGTGGCATGGGTATCATGGGACATGGTCCCCCTGGA
GCTCATCACGGACCAGGGCCAGGTGGACCTGGAGGGTACGGGCCCCCACCCCCACAGAAC
AATTTTGGAGCGCCTCCGCCAGGACCCGGTGGGTTTGGTGGACCCCCTCAAGGTCCACCG
CAGCAGGCTCAGCCTCCACAGCAATTCCAGAACCAACAACCGTGGGCAGGTGCACCCAAC
CAGTATCAGTGGCCCCAGCCTGGTGGACCCCAACAAAATGGGGCAATCCCGCAGGACCCA
AACAAGCCACCGGACAGCAATGCCGCGGCATGGGCAAATTATTACAATTATTATCAAAAC
CAAGGTCAACAACCGGCGGCAGCTGCTGCAGCAGTCGCGGCGGCGTACCCACAACAGGCG
GCGGCCGCGCCAGGGACGGTCGTACAGGCACAGACTGCTGCTGGACAACCAGATTACACG
AAAGCTTGGGAAGAGTATTACAAGAAGCAAGCTGAAGCAGCAGCTCCAGCAGCTGTCAAT
CCTGCGGCTGCTTCACAGGCTGGTGGAGCAGACTATAGTGCAGCATGGGCGGAATACTAT
CGTCAATACGCTCAGTATTATCAACAATCACAAGCCCAGCAACAATACTCTACAGCACCT
GCAGCTCCGGCACAGCAGTAG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[25-114] 9.6E-25 - T[124-203] 2.2E-23 - T[235-339] 2.0E-25 - T[354-434] 1.4E-27 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[33-110] 1.33E-18 - T[130-228] 2.78E-17 - T[238-314] 4.68E-19 - T[357-457] 4.53E-17 |
| SMART |
KH_dom (IPR004087) - T[39-109] 2.7E-17 - T[130-202] 1.8E-17 - T[240-312] 1.8E-15 - T[358-431] 4.6E-17 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[42-106] 3.3E-17 - T[134-199] 9.5E-15 - T[246-309] 3.2E-16 - T[361-428] 1.6E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.925 % | 299 | 2.16E-92 |
| FUBP2_HUMAN | 43.294 % | 298 | 3.68E-91 |
| FUBP3_HUMAN | 36.62 % | 316 | 1.2E-99 |