- Transcript 'KH2012:KH.C1.203.v1....' >
- Transcript 'KH2012:KH.C9.235.v3....' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S422.g04967.02.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
S422 [29,631 / 40,856]
Amino acid sequence
Length: 672
>Haaura.CG.MTP2014.S422.g04967.02.p
MGDYSQKRPLEDAEEPGAKKLASQNDSIGSQLGNMQNQIPGGRPTITESFRLPDKLVGLV
IGKGGENISRMQEQSGCRIQISQDCQGGEDRPCTLTGTPEEIGQCREMLQDTISKAAGNM
GVGMPAGLEEPLMGAQTVIQLMIPPDKCGLIIGKGGETIKAIQQNIGVKMMLIQDTTQNT
GMDKPLRISGEPMKVEQAKQHIEQIMAQRDLQQQQQQMQRGGGGGGGGGGGGGNGGGGGR
MNFPSGPQKLIPVPKPAVGVVIGKGGDMITRIQNETGTRVQFKQEEEDPNVPHRMCTITG
PHENIQKAIEKIQELIQSVRDHDNSGMGGGQGDGSRGRNRPGGSFGQWEGGPGGMVRGRS
GPGMNTVEYNVPTNKTGLVIGKGGENIRQINQQSQAHVEIQRNPPPGSDQMYKTFIIKGT
PEQIALAQQLIQEKVEGGPGGGGNHGHGGPGHGGGMGIMGHGPPGAHHGPGPGGPGGYGP
PPPQNNFGAPPPGPGGFGGPPQGPPQQAQPPQQFQNQQPWAGAPNQYQWPQPGGPQQNGA
IPQDPNKPPDSNAAAWANYYNYYQNQGQQPAAAAAAVAAAYPQQAAAAPGTVVQAQTAAG
QPDYTKAWEEYYKKQAEAAAPAAVNPAAASQAGGADYSAAWAEYYRQYAQYYQQSQAQQQ
YSTAPAAPAQQ*
Nucleotide sequence
Length: 2,016
>Haaura.CG.MTP2014.S422.g04967.02.t
ATGGGCGATTATTCACAAAAGAGACCACTAGAAGATGCTGAAGAACCTGGTGCAAAAAAA
TTAGCTTCACAGAATGATTCAATTGGTTCTCAATTAGGAAATATGCAGAACCAAATACCA
GGTGGAAGACCCACCATTACAGAAAGCTTTAGATTGCCGGACAAACTAGTCGGTTTGGTT
ATAGGGAAAGGTGGCGAGAACATTAGTAGAATGCAAGAACAAAGTGGATGTCGTATCCAG
ATATCGCAAGATTGTCAAGGAGGCGAAGACAGGCCATGCACATTGACAGGAACGCCAGAA
GAAATAGGTCAATGTCGTGAAATGTTGCAAGACACCATCAGCAAAGCAGCGGGTAATATG
GGTGTCGGCATGCCCGCAGGCTTAGAAGAACCATTGATGGGTGCTCAGACCGTCATACAG
CTCATGATTCCTCCCGATAAATGCGGGCTGATCATCGGCAAAGGAGGAGAAACTATTAAA
GCGATCCAGCAGAACATTGGAGTGAAAATGATGTTGATCCAAGACACCACACAGAATACA
GGGATGGATAAACCGCTGAGAATTAGCGGAGAACCGATGAAAGTTGAGCAAGCCAAGCAA
CATATCGAACAGATCATGGCTCAGCGTGATTTGCAGCAACAGCAACAACAGATGCAGAGA
GGTGGAGGTGGGGGAGGAGGAGGAGGTGGTGGTGGCGGGAACGGCGGAGGAGGAGGAAGA
ATGAATTTCCCGTCTGGACCCCAGAAACTGATCCCCGTCCCTAAACCTGCAGTCGGAGTT
GTCATCGGCAAAGGCGGAGACATGATAACTCGAATCCAGAATGAAACTGGAACGAGGGTG
CAGTTTAAACAGGAAGAAGAAGATCCAAACGTGCCTCACCGTATGTGTACGATCACCGGT
CCGCATGAAAATATCCAGAAAGCGATCGAAAAAATTCAAGAACTCATCCAGAGCGTTCGT
GATCATGATAATTCCGGAATGGGAGGCGGTCAAGGAGATGGTTCCAGAGGTCGCAACCGT
CCCGGTGGCAGTTTCGGACAGTGGGAAGGAGGACCAGGTGGCATGGTGCGCGGTCGTTCC
GGACCCGGGATGAACACTGTTGAATATAATGTGCCGACAAACAAAACCGGTCTTGTGATT
GGAAAAGGTGGTGAAAATATCCGTCAAATTAATCAACAGTCTCAAGCTCATGTTGAAATA
CAAAGAAATCCACCACCAGGAAGCGATCAAATGTATAAAACATTTATTATCAAAGGTACG
CCGGAACAGATTGCACTAGCTCAGCAACTCATTCAAGAAAAAGTTGAGGGCGGTCCCGGA
GGCGGTGGTAACCATGGACATGGAGGGCCAGGCCACGGTGGTGGCATGGGTATCATGGGA
CATGGTCCCCCTGGAGCTCATCACGGACCAGGGCCAGGTGGACCTGGAGGGTACGGGCCC
CCACCCCCACAGAACAATTTTGGAGCGCCTCCGCCAGGACCCGGTGGGTTTGGTGGACCC
CCTCAAGGTCCACCGCAGCAGGCTCAGCCTCCACAGCAATTCCAGAACCAACAACCGTGG
GCAGGTGCACCCAACCAGTATCAGTGGCCCCAGCCTGGTGGACCCCAACAAAATGGGGCA
ATCCCGCAGGACCCAAACAAGCCACCGGACAGCAATGCCGCGGCATGGGCAAATTATTAC
AATTATTATCAAAACCAAGGTCAACAACCGGCGGCAGCTGCTGCAGCAGTCGCGGCGGCG
TACCCACAACAGGCGGCGGCCGCGCCAGGGACGGTCGTACAGGCACAGACTGCTGCTGGA
CAACCAGATTACACGAAAGCTTGGGAAGAGTATTACAAGAAGCAAGCTGAAGCAGCAGCT
CCAGCAGCTGTCAATCCTGCGGCTGCTTCACAGGCTGGTGGAGCAGACTATAGTGCAGCA
TGGGCGGAATACTATCGTCAATACGCTCAGTATTATCAACAATCACAAGCCCAGCAACAA
TACTCTACAGCACCTGCAGCTCCGGCACAGCAGTAG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[30-119] 9.7E-25 - T[129-208] 2.2E-23 - T[240-344] 2.0E-25 - T[359-439] 1.4E-27 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[38-115] 1.34E-18 - T[135-233] 2.78E-17 - T[243-319] 4.68E-19 - T[362-462] 4.68E-17 |
| SMART |
KH_dom (IPR004087) - T[44-114] 2.7E-17 - T[135-207] 1.8E-17 - T[245-317] 1.8E-15 - T[363-436] 4.6E-17 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[47-111] 3.3E-17 - T[139-204] 9.6E-15 - T[251-314] 3.3E-16 - T[366-433] 1.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 44.725 % | 313 | 1.3E-97 |
| FUBP2_HUMAN | 43.88 % | 308 | 4.54E-95 |
| FUBP3_HUMAN | 36.322 % | 317 | 8.93E-100 |