- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S422.g04967.03.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
S422 [29,631 / 40,892]
Amino acid sequence
Length: 684
>Haaura.CG.MTP2014.S422.g04967.03.p
IAAKIQPDTPGPMGDYSQKRPLEDAEEPGAKKLASQNDSIGSQLGNMQNQIPGGRPTITE
SFRLPDKLVGLVIGKGGENISRMQEQSGCRIQISQDCQGGEDRPCTLTGTPEEIGQCREM
LQDTISKAAGNMGVGMPAGLEEPLMGAQTVIQLMIPPDKCGLIIGKGGETIKAIQQNIGV
KMMLIQDTTQNTGMDKPLRISGEPMKVEQAKQHIEQIMAQRDLQQQQQQMQRGGGGGGGG
GGGGGNGGGGGRMNFPSGPQKLIPVPKPAVGVVIGKGGDMITRIQNETGTRVQFKQEEED
PNVPHRMCTITGPHENIQKAIEKIQELIQSVRDHDNSGMGGGQGDGSRGRNRPGGSFGQW
EGGPGGMVRGRSGPGMNTVEYNVPTNKTGLVIGKGGENIRQINQQSQAHVEIQRNPPPGS
DQMYKTFIIKGTPEQIALAQQLIQEKVEGGPGGGGNHGHGGPGHGGGMGIMGHGPPGAHH
GPGPGGPGGYGPPPPQNNFGAPPPGPGGFGGPPQGPPQQAQPPQQFQNQQPWAGAPNQYQ
WPQPGGPQQNGAIPQDPNKPPDSNAAAWANYYNYYQNQGQQPAAAAAAVAAAYPQQAAAA
PGTVVQAQTAAGQPDYTKAWEEYYKKQAEAAAPAAVNPAAASQAGGADYSAAWAEYYRQY
AQYYQQSQAQQQYSTAPAAPAQQ*
Nucleotide sequence
Length: 2,052
>Haaura.CG.MTP2014.S422.g04967.03.t
ATCGCCGCAAAGATTCAACCTGATACACCTGGGCCTATGGGCGATTATTCACAAAAGAGA
CCACTAGAAGATGCTGAAGAACCTGGTGCAAAAAAATTAGCTTCACAGAATGATTCAATT
GGTTCTCAATTAGGAAATATGCAGAACCAAATACCAGGTGGAAGACCCACCATTACAGAA
AGCTTTAGATTGCCGGACAAACTAGTCGGTTTGGTTATAGGGAAAGGTGGCGAGAACATT
AGTAGAATGCAAGAACAAAGTGGATGTCGTATCCAGATATCGCAAGATTGTCAAGGAGGC
GAAGACAGGCCATGCACATTGACAGGAACGCCAGAAGAAATAGGTCAATGTCGTGAAATG
TTGCAAGACACCATCAGCAAAGCAGCGGGTAATATGGGTGTCGGCATGCCCGCAGGCTTA
GAAGAACCATTGATGGGTGCTCAGACCGTCATACAGCTCATGATTCCTCCCGATAAATGC
GGGCTGATCATCGGCAAAGGAGGAGAAACTATTAAAGCGATCCAGCAGAACATTGGAGTG
AAAATGATGTTGATCCAAGACACCACACAGAATACAGGGATGGATAAACCGCTGAGAATT
AGCGGAGAACCGATGAAAGTTGAGCAAGCCAAGCAACATATCGAACAGATCATGGCTCAG
CGTGATTTGCAGCAACAGCAACAACAGATGCAGAGAGGTGGAGGTGGGGGAGGAGGAGGA
GGTGGTGGTGGCGGGAACGGCGGAGGAGGAGGAAGAATGAATTTCCCGTCTGGACCCCAG
AAACTGATCCCCGTCCCTAAACCTGCAGTCGGAGTTGTCATCGGCAAAGGCGGAGACATG
ATAACTCGAATCCAGAATGAAACTGGAACGAGGGTGCAGTTTAAACAGGAAGAAGAAGAT
CCAAACGTGCCTCACCGTATGTGTACGATCACCGGTCCGCATGAAAATATCCAGAAAGCG
ATCGAAAAAATTCAAGAACTCATCCAGAGCGTTCGTGATCATGATAATTCCGGAATGGGA
GGCGGTCAAGGAGATGGTTCCAGAGGTCGCAACCGTCCCGGTGGCAGTTTCGGACAGTGG
GAAGGAGGACCAGGTGGCATGGTGCGCGGTCGTTCCGGACCCGGGATGAACACTGTTGAA
TATAATGTGCCGACAAACAAAACCGGTCTTGTGATTGGAAAAGGTGGTGAAAATATCCGT
CAAATTAATCAACAGTCTCAAGCTCATGTTGAAATACAAAGAAATCCACCACCAGGAAGC
GATCAAATGTATAAAACATTTATTATCAAAGGTACGCCGGAACAGATTGCACTAGCTCAG
CAACTCATTCAAGAAAAAGTTGAGGGCGGTCCCGGAGGCGGTGGTAACCATGGACATGGA
GGGCCAGGCCACGGTGGTGGCATGGGTATCATGGGACATGGTCCCCCTGGAGCTCATCAC
GGACCAGGGCCAGGTGGACCTGGAGGGTACGGGCCCCCACCCCCACAGAACAATTTTGGA
GCGCCTCCGCCAGGACCCGGTGGGTTTGGTGGACCCCCTCAAGGTCCACCGCAGCAGGCT
CAGCCTCCACAGCAATTCCAGAACCAACAACCGTGGGCAGGTGCACCCAACCAGTATCAG
TGGCCCCAGCCTGGTGGACCCCAACAAAATGGGGCAATCCCGCAGGACCCAAACAAGCCA
CCGGACAGCAATGCCGCGGCATGGGCAAATTATTACAATTATTATCAAAACCAAGGTCAA
CAACCGGCGGCAGCTGCTGCAGCAGTCGCGGCGGCGTACCCACAACAGGCGGCGGCCGCG
CCAGGGACGGTCGTACAGGCACAGACTGCTGCTGGACAACCAGATTACACGAAAGCTTGG
GAAGAGTATTACAAGAAGCAAGCTGAAGCAGCAGCTCCAGCAGCTGTCAATCCTGCGGCT
GCTTCACAGGCTGGTGGAGCAGACTATAGTGCAGCATGGGCGGAATACTATCGTCAATAC
GCTCAGTATTATCAACAATCACAAGCCCAGCAACAATACTCTACAGCACCTGCAGCTCCG
GCACAGCAGTAG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[42-131] 9.9E-25 - T[141-220] 2.2E-23 - T[252-356] 2.1E-25 - T[371-451] 1.5E-27 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[50-127] 1.37E-18 - T[147-245] 2.92E-17 - T[255-331] 4.82E-19 - T[374-474] 4.82E-17 |
| SMART |
KH_dom (IPR004087) - T[56-126] 2.7E-17 - T[147-219] 1.8E-17 - T[257-329] 1.8E-15 - T[375-448] 4.6E-17 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[59-123] 3.4E-17 - T[151-216] 9.9E-15 - T[263-326] 3.4E-16 - T[378-445] 1.7E-16 |
| Pfam |
FUBP_C (IPR015096) - T[643-659] 2.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 44.541 % | 313 | 1.36E-97 |
| FUBP2_HUMAN | 42.888 % | 309 | 2.23E-95 |
| FUBP3_HUMAN | 36.058 % | 317 | 8.42E-100 |