- Transcript 'Harore.CG.MTP2014.S1...' >
- Clone 'cien196724' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S443.g05098.01.t
Possible name(s)
AC011530.1; DMWD; WDR20
Gene model
Location
S443 [11,722 / 16,722]
Amino acid sequence
Length: 708
>Haaura.CG.MTP2014.S443.g05098.01.p
MALDSGRKETDIKAQFTTREGIYKQMPNSEYCRPNRVPHTTQGPPSTSTPVKVSFAEVNT
DDETHTRIVFTIGRDLFYFNYEGVSQPVDLNKPLDKRTYKGVAPTCHHVNSHTSSSDSVR
VAVGFAAGQVQIIDVGTKQSLQILNEERMTEKSPVTCVKWLPQSDSILLSSHANGHMYTY
DSSQDNVNVIPQYHEKPYKMCGSIAIYTLKNKTYPSSTNGQTLGVVLKNPLHKWVVTTDN
SAIHEFEFSHDGKHIAIVSQDGYLRILEYDTFEPKGFMKSYFGGLLCCCWSPDGRYIVTG
GEDDLITVWSFHGSYVLARGHGHRSWVSNVSFDSYCCNIPSIEEMGNSYGIDFSCIATDG
RRQHPDGGSKSSKDDKKSPGSESRGESPLIISKISRNCIRDSDRNRGNSLTSRISRVSLA
ADLADPSKQFFYRFGSVGQDAQLCLWELTEDILFPKRRTATLIEGLAGGHVESDCKALRN
NFGQMNGLYLPHEHSTNDEINMVHAAEAADAKGKHPKSSNITNSNSPMKEHSGHRGLHFF
SLSKDFFKSESSTATSQGPTGEKFSTLGSRDVGQRKEGSKEHKRNLSLPYFGSKNSSHSH
SSVNGMSKSSHHKHNEESKTLGTVLCPRLNETTMLEPLVCKRIAQGRLTCISFQKDSIVT
ACQDGFIQTWARPVTLMPDSRPRSPSNLVANMHMNISSPVNKSGTVV*
Nucleotide sequence
Length: 2,124
>Haaura.CG.MTP2014.S443.g05098.01.t
ATGGCACTTGATAGTGGAAGAAAAGAAACGGACATCAAAGCACAGTTTACTACTAGAGAA
GGAATATACAAACAAATGCCGAACTCGGAATACTGCAGACCAAACCGAGTACCTCATACA
ACACAGGGTCCTCCGTCGACCTCTACCCCCGTAAAAGTGAGTTTTGCCGAAGTGAACACA
GATGACGAAACACATACTCGAATTGTGTTTACGATCGGACGTGATTTATTTTACTTTAAC
TACGAAGGAGTTTCACAGCCTGTAGATTTGAACAAACCTCTCGACAAACGAACTTACAAA
GGCGTTGCACCAACATGTCATCATGTGAATAGTCATACGTCATCATCAGATAGCGTGAGA
GTTGCTGTCGGATTTGCTGCTGGTCAGGTTCAAATCATTGATGTGGGTACGAAACAGAGT
TTGCAGATCTTGAATGAAGAAAGAATGACAGAGAAATCACCAGTGACCTGTGTCAAATGG
TTACCACAAAGCGATTCTATTTTATTATCTTCACATGCAAATGGACACATGTACACTTAC
GATTCAAGTCAAGACAATGTTAACGTCATACCACAATATCATGAAAAGCCGTATAAGATG
TGTGGATCGATCGCGATCTACACGCTGAAAAACAAAACATATCCTTCCTCAACCAATGGA
CAGACTCTCGGAGTTGTCTTGAAAAATCCTCTTCACAAATGGGTTGTCACCACTGACAAT
TCAGCTATTCACGAGTTTGAGTTCTCTCATGACGGGAAGCATATTGCTATTGTATCGCAG
GATGGATACCTTCGCATTCTAGAATACGATACATTCGAGCCAAAAGGATTCATGAAGAGC
TACTTCGGCGGCTTGTTGTGTTGCTGCTGGAGTCCAGATGGACGATACATAGTGACGGGA
GGTGAAGACGACCTGATCACCGTCTGGTCGTTCCATGGCAGTTACGTCCTTGCCAGAGGT
CACGGTCATAGGTCGTGGGTCAGCAACGTTTCATTTGATTCATATTGTTGCAACATTCCC
AGCATTGAGGAAATGGGGAATTCCTACGGGATTGACTTTTCATGCATTGCAACAGACGGC
AGGAGACAGCATCCTGATGGAGGATCTAAATCATCCAAGGACGATAAAAAAAGCCCAGGC
AGCGAGTCTCGAGGGGAATCACCATTAATAATTAGCAAAATTTCAAGAAATTGTATTCGG
GACTCGGACCGCAATAGGGGCAACAGCCTTACGTCTAGAATATCACGTGTCAGCCTGGCT
GCCGATTTGGCTGATCCTTCCAAACAGTTTTTTTATAGGTTCGGGTCAGTCGGTCAAGAC
GCACAGCTGTGTCTGTGGGAATTAACAGAAGACATACTGTTCCCTAAACGAAGAACTGCC
ACTCTAATCGAAGGCCTCGCTGGCGGTCATGTAGAGAGCGACTGTAAGGCTTTGCGAAAT
AATTTCGGGCAAATGAACGGTTTGTACTTGCCACATGAACATTCGACAAACGACGAAATC
AACATGGTTCACGCAGCAGAAGCTGCCGATGCCAAAGGAAAACACCCGAAATCCAGCAAC
ATTACTAACTCTAATTCTCCTATGAAAGAGCATAGTGGTCATAGAGGTCTTCATTTTTTT
TCCTTGTCGAAAGATTTTTTCAAGAGTGAGAGCAGCACAGCCACTTCACAAGGACCCACA
GGTGAAAAGTTTTCAACATTAGGCAGCAGAGATGTTGGACAACGGAAGGAAGGTAGCAAG
GAACATAAAAGAAATCTCAGCCTACCATACTTCGGATCAAAAAACTCAAGTCATTCGCAT
AGTTCAGTAAATGGAATGAGTAAGAGCAGTCACCACAAACACAATGAGGAGTCAAAAACA
CTCGGAACAGTATTATGTCCCCGGCTGAACGAAACGACAATGCTTGAACCACTTGTATGC
AAGAGGATTGCCCAAGGTCGTCTGACTTGTATAAGCTTCCAAAAAGACAGCATTGTTACA
GCATGTCAAGACGGTTTTATTCAAACATGGGCAAGGCCAGTTACGCTTATGCCCGACTCC
AGACCTAGAAGCCCTTCTAATCTTGTTGCTAATATGCACATGAATATCTCGAGCCCTGTT
AATAAGAGCGGAACAGTTGTGTGA
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[94-194] 2.0E-33 - T[232-337] 2.0E-33 - T[433-449] 2.0E-33 - T[634-671] 2.0E-33 |
| SMART |
WD40_repeat (IPR001680) - T[137-181] 0.77 - T[227-268] 1.7 - T[271-310] 1.1E-5 - T[637-671] 36.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[236-333] 13.791 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[278-319] 10.542 |
| Pfam |
WD40_repeat (IPR001680) - T[285-310] 6.4E-4 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[597-676] 1.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR20_HUMAN | 40.504 % | 451 | 3.22E-151 |
| DMWD_HUMAN | 47.794 % | 281 | 1.04E-84 |