Aniseed - Transcript Card

Transcript 'KH2012:KH.C5.177.v1....' >
Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S46.g01157.01.t

Possible name(s)

EEA1; FYCO1; RUFY2

Gene model

Haaura.CG.MTP2014.S46.g01157

Location

S46 [65,881 / 67,616]

Sequences

Amino acid sequence

Length: 554

>Haaura.CG.MTP2014.S46.g01157.01.p
MRKQKREEDEQHQEEVKNLQDELNMREDSLGKKDEEILILKNSLSGKDSDLSSLSNRIKI
AEEKVEATERTSSEHCTELQGQIEKLNTEKGDMAKQMKTRDEIICAHEGTINIAKEKADE
QDVSLRQAYAELGKVCDNLKAETEKHTAACEELNVIKLKVDSSGNDIVRLSEENSGLTTS
LEMSNVTIDKLSKDLERKNTDLISAQSSLKERAKELCETKEILASKQEEWNGAKLNLDTE
VLKWKDDHTVLEIKFQEEASLRSKEKEASEDEKEKLKKDLRVKESHWSGEREELLQSQAT
LKGAQQILISAKVELQKKLESASIQLNDEKERYDKMELALQKEKSVVETEFSNLKKKVES
TQDKMLQIQEEKQRSEDRLQLEVSTLRDNLDSVRGEWQGAIQQVDKVNKDMDELKGQIVV
MQATVQNNADERRALLERCILAEQQVEQMEANEQQIKRRLEDAQAAMHELGRENQAMQVK
HSSVLSRQWTSDKHAVQCLSCKQPFSLTIRKHHCRHCGMIFCNECSSKLATVAASKNPVR
VCEKCYDDLLTVQ*

Nucleotide sequence

Length: 1,662

>Haaura.CG.MTP2014.S46.g01157.01.t
ATGAGGAAGCAGAAAAGAGAAGAAGACGAGCAGCATCAAGAAGAAGTAAAAAATTTACAA
GATGAATTGAACATGAGAGAGGATTCCTTGGGAAAGAAAGATGAAGAAATTCTTATCCTA
AAAAACAGCTTGTCTGGTAAAGATTCGGATTTAAGTTCTCTCTCGAATAGAATTAAAATT
GCTGAAGAAAAGGTAGAGGCTACTGAAAGAACGAGTAGCGAGCACTGTACTGAATTACAA
GGCCAAATTGAAAAGCTGAACACAGAAAAAGGTGATATGGCAAAGCAGATGAAAACGAGA
GATGAAATCATATGCGCTCATGAAGGTACCATAAACATAGCTAAAGAGAAGGCTGATGAG
CAAGATGTGAGTTTAAGACAAGCTTATGCAGAACTTGGCAAGGTGTGTGACAATCTTAAA
GCAGAGACTGAAAAGCACACGGCAGCTTGTGAAGAACTAAATGTCATCAAATTAAAAGTA
GATTCATCAGGAAATGATATTGTACGCCTATCAGAAGAAAATTCAGGGCTTACGACTTCT
CTGGAGATGAGCAATGTCACGATTGACAAGTTGTCCAAGGATCTTGAAAGAAAAAATACA
GACTTGATATCCGCGCAGTCGTCTCTGAAAGAAAGAGCAAAAGAACTGTGTGAGACAAAG
GAAATTCTGGCAAGTAAGCAAGAGGAATGGAATGGTGCTAAATTGAATCTTGACACTGAA
GTTTTGAAGTGGAAAGATGATCATACTGTTTTAGAGATAAAATTTCAGGAAGAAGCAAGT
TTGAGATCAAAGGAAAAAGAAGCTTCCGAGGACGAAAAAGAAAAGTTAAAAAAGGATTTG
AGAGTGAAGGAATCACATTGGAGTGGAGAGAGGGAAGAATTATTACAATCTCAAGCAACT
TTGAAAGGTGCCCAACAGATTTTGATATCTGCTAAAGTGGAATTGCAAAAGAAACTGGAG
AGCGCTAGCATACAGTTAAATGACGAGAAAGAGAGATATGACAAGATGGAACTTGCGCTA
CAGAAGGAAAAATCGGTAGTTGAAACAGAATTTAGCAACTTGAAGAAAAAAGTGGAATCT
ACTCAAGATAAGATGCTGCAGATCCAGGAAGAAAAACAAAGATCTGAAGACAGACTACAG
CTTGAAGTAAGTACCTTACGGGACAATTTGGACAGCGTACGTGGTGAATGGCAGGGTGCT
ATTCAGCAAGTGGACAAGGTGAACAAGGACATGGATGAGTTAAAAGGACAAATAGTCGTG
ATGCAGGCCACTGTGCAAAACAATGCGGACGAAAGGAGGGCACTGTTAGAGAGATGTATT
TTGGCAGAACAGCAGGTGGAACAGATGGAAGCTAACGAACAGCAAATCAAACGAAGATTG
GAAGATGCACAGGCTGCTATGCATGAGTTGGGTCGTGAAAATCAAGCGATGCAGGTGAAA
CATTCGTCAGTGCTTTCGCGACAGTGGACCAGCGATAAGCATGCGGTTCAATGTCTGTCC
TGCAAACAGCCGTTTTCGCTCACCATACGCAAACACCATTGCCGCCATTGTGGGATGATA
TTCTGTAACGAATGCTCTTCTAAGTTGGCGACAGTAGCGGCCTCCAAAAATCCTGTGCGA
GTATGTGAAAAATGTTATGACGATCTGCTTACAGTGCAATAG

InterProScan

SMART	Znf_FYVE (IPR000306) - T[484-551] 7.5E-25
SUPERFAMILY	Znf_FYVE_PHD (IPR011011) - T[488-551] 8.63E-20
Pfam	Znf_FYVE (IPR000306) - T[488-549] 3.0E-19
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[489-550] 2.4E-21
ProSiteProfiles	Znf_FYVE-rel (IPR017455) - T[492-550] 13.275

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EEA1_HUMAN	39.921 %	207	2.44E-57
RUFY2_HUMAN	37.5 %	82.4	1.69E-16
RUFY1_HUMAN	27.092 %	87	7.1E-18