- Transcript 'Cisavi.CG.ENS81.R44....' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S476.g05282.01.t
Possible name(s)
IGFALS; LGR6; LRRC15
Gene model
Location
S476 [41,862 / 44,408]
Amino acid sequence
Length: 393
>Haaura.CG.MTP2014.S476.g05282.01.p
MFPECSRIMESGIAHKKGDYFHKKQILKVDCSGQNVTTVDSGFLRGIIREEEKIQIRRTH
KAFQGGLYQALHDEGVTKPIGYYLTLEEASIKEIEDGAFNSLPSLEGLNLKNNKLKKIAR
RSFEGLRHLTDLSLDGNEISQIESSSFFDLQNVKYLTATMNALKDVDYFSFQGLSKSNVL
NLSNNSITLMNSGTFAGAPLLEHLYLSHNRIRQLTGGTMAGLVQLKTLSLDNNIIKTISD
GTFLGMRNLENLDLSNNYLSKIKFNTFRGLYYLRRLKLQNNKLISIEDLSFISMPLLREL
DISNNGLSTMSRGLFTGLINLQVFQISNNWMHEKAAERDEDLLDAIQIICRKPGLHYADV
RGNGLRDMLQGEDAVTYTIIDFSNSDQHRCVL*
Nucleotide sequence
Length: 1,179
>Haaura.CG.MTP2014.S476.g05282.01.t
ATGTTTCCAGAATGCTCGCGGATCATGGAAAGTGGAATTGCTCACAAGAAGGGAGATTAC
TTTCACAAAAAGCAAATTTTGAAGGTTGATTGCAGTGGTCAGAACGTAACAACAGTCGAT
TCCGGTTTTCTTCGTGGGATAATCAGAGAGGAAGAAAAAATTCAAATACGGCGAACTCAC
AAAGCGTTTCAAGGTGGACTTTACCAAGCTTTGCACGACGAAGGGGTTACGAAGCCTATC
GGTTATTATTTAACACTGGAAGAAGCAAGCATCAAAGAAATAGAAGATGGGGCATTCAAC
TCACTGCCTTCGCTTGAAGGCTTGAATTTGAAAAACAACAAGTTGAAAAAGATCGCGCGA
CGTTCCTTCGAGGGTTTACGACATTTGACCGATCTTAGCTTGGACGGAAATGAAATATCA
CAGATTGAAAGCTCTTCCTTTTTTGATCTGCAAAACGTTAAATATCTCACGGCAACTATG
AACGCGCTGAAGGACGTTGACTACTTCAGTTTCCAAGGCTTGTCTAAGTCGAATGTTCTC
AACTTGAGCAACAACAGTATAACGCTGATGAATTCAGGAACTTTCGCTGGCGCTCCTCTT
TTAGAGCATCTGTATCTATCACACAACAGAATACGACAGTTAACCGGAGGAACAATGGCC
GGACTTGTACAACTAAAAACGCTTTCACTCGATAACAATATTATTAAAACGATATCAGAC
GGAACTTTCCTGGGGATGAGAAATCTTGAGAATCTGGATTTGTCAAATAATTATCTATCC
AAGATTAAGTTCAACACGTTTAGGGGCTTGTACTATCTTCGACGACTGAAGCTTCAAAAC
AACAAACTTATTTCTATCGAAGATCTGTCGTTCATCTCTATGCCACTGCTGCGAGAACTT
GATATTTCTAACAATGGACTTTCAACAATGTCCAGGGGATTGTTCACCGGGTTGATAAAC
CTGCAAGTGTTTCAAATTTCAAATAACTGGATGCATGAGAAGGCAGCTGAACGCGACGAA
GATCTGCTTGATGCCATACAAATTATTTGCCGAAAACCCGGTTTGCACTATGCTGATGTA
AGGGGAAACGGATTACGTGACATGCTACAGGGAGAAGATGCAGTCACGTATACTATCATT
GACTTTTCGAATTCAGATCAACATCGCTGTGTTCTTTAA
| Pfam |
Leu-rich_rpt (IPR001611) - T[83-139] 6.2E-15 - T[161-211] 7.4E-12 - T[224-283] 1.2E-13 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[102-125] 0.025 - T[126-149] 0.57 - T[174-197] 32.0 - T[199-221] 15.0 - T[222-245] 0.12 - T[246-269] 0.052 - T[270-293] 53.0 - T[294-317] 0.015 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[104-125] 6.765 - T[128-149] 7.573 - T[176-197] 4.786 - T[200-221] 7.042 - T[224-245] 8.066 - T[248-269] 7.835 - T[272-293] 7.797 - T[296-317] 5.81 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[227-386] 1.8E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALS_HUMAN | 32.639 % | 120 | 9.62E-30 |
| LRC15_HUMAN | 36.179 % | 109 | 5.01E-26 |
| LGR6_HUMAN | 30.04 % | 104 | 2.73E-24 |