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  1. Transcript 'Haaura.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S47.g01171.02.t

Possible name(s)

ACTA2; ACTB; ACTG1

Gene model

Haaura.CG.MTP2014.S47.g01171

Location

S47 [55,151 / 55,567]

Sequences

Amino acid sequence

Length: 113

>Haaura.CG.MTP2014.S47.g01171.02.p
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK

Nucleotide sequence

Length: 339

>Haaura.CG.MTP2014.S47.g01171.02.t
ATGGATGATGATGTTGCTGCTCTCGTTGTCGACAATGGATCGGGTATGTGCAAAGCTGGA
TTTGCTGGTGATGACGCTCCAAGAGCCGTTTTTCCGTCTATCGTAGGACGTCCAAGACAT
CAGGGTGTTATGGTCGGTATGGGCCAAAAAGACAGCTACGTCGGAGATGAAGCGCAAAGT
AAAAGAGGAATTCTTACCCTTAAATACCCTATCGAGCACGGTATCGTTACAAACTGGGAC
GATATGGAGAAAATCTGGCATCACACATTTTACAACGAACTTCGTGTAGCCCCAGAAGAA
CATCCAGTCCTTCTTACTGAAGCTCCTCTCAATCCCAAA

InterProScan

PANTHER
Actin (IPR004000) - T[1-113] 8.3E-78
Pfam
Actin (IPR004000) - T[3-113] 2.2E-39
PRINTS
Actin (IPR004000) - T[26-35] 3.7E-24 - T[49-60] 3.7E-24 - T[61-83] 3.7E-24
ProSitePatterns
Actin_CS (IPR004001) - T[53-63] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 95.575 % 238 1.38E-79
ACTB_HUMAN 99.115 % 242 1.95E-81
ACTA_HUMAN 91.964 % 228 8.05E-76





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