- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.L154.34.v2...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S47.g01171.03.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
S47 [55,151 / 56,688]
Amino acid sequence
Length: 401
>Haaura.CG.MTP2014.S47.g01171.03.p
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDNEMTAAANSSTIEKSY
ELPDGQVITIGNERFRCAEAMFQPSFLGMESAGMHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRVQKEIVSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIGSIPGVIYVLPYYSVIITSICVSDFLHHLFQ*
Nucleotide sequence
Length: 1,203
>Haaura.CG.MTP2014.S47.g01171.03.t
ATGGATGATGATGTTGCTGCTCTCGTTGTCGACAATGGATCGGGTATGTGCAAAGCTGGA
TTTGCTGGTGATGACGCTCCAAGAGCCGTTTTTCCGTCTATCGTAGGACGTCCAAGACAT
CAGGGTGTTATGGTCGGTATGGGCCAAAAAGACAGCTACGTCGGAGATGAAGCGCAAAGT
AAAAGAGGAATTCTTACCCTTAAATACCCTATCGAGCACGGTATCGTTACAAACTGGGAC
GATATGGAGAAAATCTGGCATCACACATTTTACAACGAACTTCGTGTAGCCCCAGAAGAA
CATCCAGTCCTTCTTACTGAAGCTCCTCTCAATCCCAAAGCTAACAGGGAAAAAATGACA
CAAATCATGTTCGAAACATTCAACACACCGGCAATGTACGTTGCTATTCAAGCCGTATTG
TCTCTCTATGCATCCGGAAGAACTACTGGAATTGTTATGGACTCCGGTGATGGTGTTTCT
CATACGGTGCCAATCTATGAAGGATACGCCCTTCCTCACGCCATCTTGCGTCTCGATTTA
GCAGGGCGTGACCTCACCGATTACCTAATGAAAATTCTCACCGAGAGAGGCTATTCCTTC
ACCACCACAGCTGAACGTGAAATTGTCCGTGATATCAAGGAGAAGCTTTGTTATGTCGCA
CTCGACTTCGACAATGAGATGACTGCTGCAGCCAACTCTAGCACTATAGAGAAGAGTTAC
GAGTTGCCCGATGGTCAAGTAATCACTATCGGTAACGAGAGATTCCGATGCGCAGAGGCT
ATGTTCCAGCCATCTTTCTTGGGTATGGAATCCGCCGGCATGCATGAGACCACGTACAAC
TCTATTATGAAATGCGACGTCGATATCCGTAAGGACTTGTACGCTAACACTGTGTTATCC
GGAGGCACCACCATGTACCCAGGAATCGCAGATCGTGTGCAGAAGGAAATCGTTAGCCTC
GCTCCCAGTACAATGAAGATTAAAATCATTGCCCCACCCGAGAGAAAATATTCCGTATGG
ATCGGAGGATCCATCTTGGCTTCTCTGTCTACCTTCCAGCAAATGTGGATCTCGAAGCAA
GAATACGATGAATCGGGCCCGTCAATTGGGTCCATACCTGGTGTAATATATGTCTTACCG
TATTATTCTGTTATAATAACAAGTATCTGTGTATCTGATTTTCTACATCATTTGTTTCAA
TAA
| PANTHER |
Actin (IPR004000) - T[1-369] 3.5E-265 |
| Pfam |
Actin (IPR004000) - T[3-369] 6.2E-145 |
| SMART |
Actin (IPR004000) - T[5-372] 2.3E-226 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.6E-57 - T[49-60] 1.6E-57 - T[61-83] 1.6E-57 - T[115-128] 1.6E-57 - T[140-159] 1.6E-57 - T[236-252] 1.6E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . - T[356-364] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 94.309 % | 738 | 0 |
| ACTB_HUMAN | 95.393 % | 743 | 0 |
| ACTA_HUMAN | 91.304 % | 719 | 0 |