- Transcript 'KH2012:KH.C10.87.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Region 'REG00000127' >
- Transcript 'KH2012:KH.L4.55.v1.A...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S482.g05315.01.t
Possible name(s)
KDM2A; KDM2B; PHF8
Gene model
Location
S482 [7,906 / 13,795]
Amino acid sequence
Length: 923
>Haaura.CG.MTP2014.S482.g05315.01.p
MATSTMNGNERNLRHKSVKVYDDDEVEDEIDGKRTFDVMDKVKSNRYNATFVAELTSEEF
SYKYIQKNGFAAPIHFTESEHLGMLMPNPENFTVNEVRAHVGGRRMLDVMECVTQRAMEM
SMRDFAQYFESSERKRIYNVISLEFSNTRLGPLVKRPAVVDSIDWIDLCWPPHLKYEQSE
QTNKMSGMKYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHVLKGGKLFWLIPPTNKNLEA
YERWTLSGKQGDVFFADTVDKCQRVELMEGDSLMIPSGWIHSVYTPKDSIVFGGNFLHSF
NIPMQLRIAQLEERLHVPPRFRFPFFQEVLWYALERYVCNLKGKSFLTEETQKKSLLLKR
QRSHDSTDASMQNEDEPEIEDMKKDHIHLTPYEYKGIQRLLETLQNLPESKRFVPDGIAD
EEGLLATAKEMLWEHSADDPEIAITGHTILGWPKGYRSERRVMKRSRSEDGKPGYKRPPS
ASRVRRVRCKECVACLRDDCGDCVYCKDMKKYGGPGTMKQSCLLRRCMNPLMPSGARAEV
GPATPVPKTPPVSVLAVKEEALEDDSPPVKRGKKSGYRVYENSQPKTPKVEKVKISKEQS
PLVPRVTIPRIPKKDILQYVIRPAPASPTEDYDTLPAEGENEEQISDAVRKRQAWMPIFQ
HLSQTDLSRCMRVCKTFLRWCSNPALWQDVDLSESEITQETLRCVVRRMPSRVDLTRSYV
SSDQLSWLLKRCPSIRNLILAGSSWSVTAALCSASCPPLHTLALSWVSGFTDSHLKQLIS
PPTDGRPGQQVTHTRLRFCRHLYLNGTDITDAGVALLPSKMPHLHSLDLTYCTISDKTIK
CLVSAANSQTCSRLTTIVARSCPDITQKALKHITEFKNLSRVDLRDCCQITEESCLDMID
KNQKKTILMPEVGLFKCRKEKS*
Nucleotide sequence
Length: 2,973
>Haaura.CG.MTP2014.S482.g05315.01.t
GTGCCTATTGCCACAAGACCATTGCTACCAACGAAATATACACGCTAAGCTCTCACAAAT
GGTCAGCAGGTTCGAGGCAAGATTTTAGTAAATATAATAATATGCTGCTGCGGCTGCCGT
GGGTGGCCGACTATCGACAATGGATCCCAAATTTTGTCTGTGGTTAATGGTCGTACTTAG
ATTAAACATCAAATTTGCTGCAATATGGCTACAAGCACAATGAATGGAAATGAAAGAAAC
CTACGTCATAAATCTGTGAAAGTTTATGATGACGACGAGGTAGAGGACGAGATAGATGGC
AAAAGAACATTTGACGTTATGGATAAAGTGAAGTCGAACAGATACAATGCTACTTTTGTA
GCCGAGCTCACCTCAGAGGAATTTTCATACAAATATATTCAGAAGAATGGTTTCGCTGCT
CCAATCCATTTTACAGAAAGTGAGCACCTAGGTATGCTGATGCCAAATCCCGAGAATTTC
ACCGTCAACGAAGTTAGAGCACATGTCGGTGGCCGTCGAATGCTTGATGTGATGGAATGC
GTAACGCAAAGAGCGATGGAGATGTCTATGCGAGATTTTGCTCAGTATTTTGAAAGCTCT
GAGCGAAAGAGAATATACAACGTCATATCGCTGGAGTTTTCAAACACGCGTCTCGGTCCA
CTTGTTAAACGCCCCGCTGTCGTCGATAGTATCGACTGGATCGACCTATGCTGGCCACCT
CATCTTAAGTATGAACAGAGCGAACAAACAAACAAAATGTCTGGAATGAAATATCCAAAA
GTCCAAAAATATTGTTTGATGTCGGTTCGCGGATGCTACACAGATTTCCATGTTGATTTT
GGGGGAACCTCCGTATGGTATCATGTATTGAAGGGAGGGAAGTTATTCTGGCTAATTCCA
CCGACGAACAAAAATCTAGAAGCTTACGAAAGATGGACGTTGTCTGGCAAGCAGGGTGAT
GTGTTTTTCGCCGACACGGTGGATAAATGCCAGAGGGTCGAGCTTATGGAAGGTGATTCT
CTCATGATACCCAGCGGATGGATACATTCTGTCTACACACCCAAGGATTCGATCGTGTTC
GGTGGAAATTTTCTTCATTCGTTCAATATCCCGATGCAGCTGAGGATTGCACAGTTAGAA
GAGAGGTTACATGTTCCACCAAGATTCAGATTCCCCTTTTTCCAAGAGGTTCTCTGGTAT
GCTCTCGAGAGATATGTCTGCAACCTTAAAGGTAAGTCTTTCCTTACCGAAGAAACCCAG
AAGAAATCATTACTACTAAAACGACAACGGTCCCATGATAGCACAGATGCATCAATGCAG
AATGAAGATGAGCCTGAAATAGAAGATATGAAAAAGGATCATATTCATTTAACCCCATAT
GAATACAAAGGCATTCAGAGGCTGCTAGAAACATTACAAAATCTTCCTGAAAGCAAAAGA
TTTGTTCCTGATGGAATTGCAGATGAAGAAGGCCTTCTAGCCACTGCCAAAGAGATGCTG
TGGGAACATTCGGCAGATGACCCAGAGATCGCGATAACTGGGCACACGATACTTGGCTGG
CCAAAAGGTTATAGATCCGAACGCAGGGTGATGAAACGATCCAGATCAGAAGATGGCAAG
CCCGGATACAAGCGACCGCCATCCGCCAGCAGGGTAAGAAGAGTAAGATGCAAAGAGTGT
GTCGCTTGCTTGAGAGACGATTGCGGAGATTGTGTGTACTGCAAAGACATGAAGAAATAT
GGTGGACCGGGAACTATGAAACAGTCGTGTTTGCTTAGAAGATGCATGAACCCTCTGATG
CCTTCTGGCGCACGAGCAGAGGTTGGCCCGGCAACTCCGGTCCCTAAAACACCTCCTGTC
TCTGTGTTAGCAGTAAAAGAGGAAGCTCTTGAAGATGACTCTCCCCCTGTCAAACGGGGC
AAAAAATCGGGTTACAGAGTGTATGAAAATTCACAACCCAAAACTCCTAAAGTTGAGAAA
GTTAAAATAAGTAAGGAGCAATCACCATTGGTACCACGGGTCACAATACCACGAATCCCC
AAAAAAGATATTTTACAGTATGTAATAAGGCCTGCCCCCGCGTCTCCAACCGAAGATTAT
GACACACTACCAGCTGAAGGAGAAAATGAAGAACAAATCAGTGATGCAGTAAGGAAACGT
CAAGCATGGATGCCGATTTTTCAGCACTTGTCGCAGACCGACCTCAGTCGGTGCATGCGC
GTTTGCAAAACCTTTTTGCGGTGGTGTTCTAATCCAGCTTTGTGGCAGGACGTTGACCTG
TCCGAATCGGAGATAACCCAAGAGACGCTTCGCTGCGTCGTCAGGCGGATGCCGTCCCGG
GTCGACCTGACGAGGAGCTATGTCTCTAGTGATCAGTTGTCCTGGTTGTTAAAAAGGTGT
CCAAGTATTCGTAACCTCATCCTTGCAGGAAGCTCTTGGTCTGTAACAGCTGCCCTGTGT
TCTGCATCTTGTCCTCCTTTACACACACTGGCTCTTTCGTGGGTCAGCGGTTTCACCGAC
TCTCACCTCAAACAACTCATTTCTCCTCCGACCGATGGCCGTCCCGGCCAACAAGTGACA
CATACTCGGTTGAGATTTTGTAGGCATCTTTACCTCAATGGAACAGACATTACGGATGCC
GGTGTTGCCCTTCTACCTTCAAAAATGCCTCACTTGCATTCTTTAGACCTAACCTACTGC
ACCATTTCAGACAAGACCATCAAGTGCTTGGTCTCTGCTGCCAACAGCCAGACGTGCTCC
AGGCTGACCACGATTGTGGCGCGTAGTTGTCCGGACATTACACAGAAAGCTCTTAAGCAC
ATTACGGAATTTAAAAATTTGTCTAGGGTTGACTTAAGAGATTGTTGTCAAATTACTGAA
GAATCCTGCCTAGATATGATCGACAAGAACCAAAAAAAGACAATTCTCATGCCCGAAGTG
GGTCTGTTCAAGTGCAGGAAAGAAAAATCGTGA
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[145-313] 29.121 |
| SMART |
JmjC_dom (IPR003347) - T[145-313] 3.7E-33 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[482-528] 13.057 |
| Pfam |
Znf_CXXC (IPR002857) - T[483-527] 1.7E-13 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[653-913] 1.8E-40 |
| Pfam |
F-box_dom (IPR001810) - T[654-688] 2.0E-6 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[756-781] 160.0 - T[821-845] 18.0 - T[851-876] 21.0 - T[877-901] 120.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KDM2A_HUMAN | 58.501 % | 446 | 7.77E-140 |
| KDM2B_HUMAN | 54.098 % | 421 | 4.93E-129 |
| PHF8_HUMAN | 43.871 % | 291 | 1.22E-83 |