- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Moocul.CG.ELv1_2.S40...' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S485.g05332.01.t
Possible name(s)
FMR1; FXR1; FXR2
Gene model
Location
S485 [2,106 / 4,331]
Amino acid sequence
Length: 588
>Haaura.CG.MTP2014.S485.g05332.01.p
MDERTLEVRGSNGAYYKAFLCDIQPTGVLVTFENNWQPERVIPFQEVRLASCGNPKTDEF
IEGQEVEVHTRANDNEPCGWWHSRIKMSKGEFFVIEYQCDTKYTEIVTKDRLRHMNKNLP
LSPDKMRKISLDVPPDLQDFCTKYVDAHKEFERSTGAVMVKYSTTQKKLDVIVTSVSAHR
RVTIVADLHFRGLRTKLGMLQRVEEASKHLEMSQQRAESCVERFSVQEDLVGLAIGTGGA
NIMTARKIPGVVDIVLDEATHTFSIYGETKEAVSQARDILEFCEDEVIVPRAYVGKVIGK
KGATIQEMIDKSGVLRVRVVGDEENTDKKIEPGLVPFRFVGTRESIRNAKALLDYHVAYL
RDLDQLRMEQLSINQRIRQLDGNFSASQLSMGSLPPQGESDTDGNYRRRRYGPSKGGRYR
KRGGEGDGTTTNSEMSNISDTGSETSDTVSENKAAAVPLPQRRYSKENHHHVADGSGDGN
RNVKGKNEATNNNSNRNRFEALNGVKDNSGEDVIQNGTEKEVNGVKNDSVNNSNGKAIVP
PAGAKSKKKNRNKNKKSKAAEIVQNGETEESLPTPAENGSEDKEVEPA
Nucleotide sequence
Length: 1,764
>Haaura.CG.MTP2014.S485.g05332.01.t
ATGGATGAGCGAACCTTAGAAGTGCGTGGCTCTAACGGAGCTTATTACAAAGCATTCCTA
TGCGACATACAACCAACAGGAGTCCTCGTAACTTTCGAGAACAACTGGCAGCCAGAAAGA
GTCATACCGTTTCAGGAAGTACGGCTCGCCAGCTGTGGGAATCCGAAAACTGACGAGTTT
ATTGAAGGTCAGGAAGTGGAGGTTCACACGAGAGCGAACGACAATGAACCTTGCGGATGG
TGGCATTCCCGGATCAAGATGAGCAAAGGGGAATTCTTTGTCATAGAATACCAGTGTGAT
ACCAAATACACAGAGATCGTTACGAAGGATCGCTTGCGTCACATGAACAAAAACTTGCCG
CTATCTCCTGATAAAATGAGGAAAATTTCATTAGATGTTCCGCCAGATCTTCAGGACTTC
TGTACCAAATACGTCGATGCCCACAAAGAATTTGAGCGCAGTACGGGTGCGGTCATGGTG
AAATATTCCACAACGCAGAAAAAACTGGATGTGATCGTGACTAGTGTGTCTGCCCACCGT
CGAGTCACAATAGTGGCTGACTTGCATTTTAGAGGTTTGCGAACGAAACTCGGCATGTTA
CAACGTGTCGAAGAAGCTTCAAAACATCTGGAGATGTCGCAGCAGCGAGCAGAATCGTGT
GTGGAGAGATTCTCGGTTCAAGAAGATCTCGTCGGTTTGGCTATAGGGACCGGCGGAGCA
AACATAATGACGGCACGTAAGATCCCCGGGGTCGTGGACATTGTGCTAGACGAGGCCACT
CACACTTTTAGTATTTATGGGGAAACAAAAGAAGCCGTCAGTCAAGCGAGGGACATCCTT
GAATTCTGCGAAGACGAGGTCATTGTGCCAAGAGCTTACGTCGGAAAAGTTATTGGGAAA
AAAGGAGCGACTATACAAGAGATGATCGACAAGTCAGGGGTGCTCCGAGTTCGAGTCGTT
GGAGACGAAGAGAACACTGATAAGAAAATCGAACCCGGATTGGTTCCTTTCCGCTTCGTC
GGGACTAGAGAAAGTATTAGGAACGCCAAAGCCTTGCTGGATTATCATGTTGCTTATTTG
AGGGATCTCGATCAGTTACGAATGGAACAGTTAAGTATTAATCAACGTATCAGACAACTT
GATGGTAACTTTTCTGCTTCCCAACTCTCCATGGGAAGCCTCCCTCCTCAGGGTGAGAGC
GACACCGACGGTAACTACAGACGCCGACGATATGGTCCCTCTAAAGGTGGGCGGTATAGA
AAACGTGGCGGGGAGGGCGACGGAACCACTACGAATTCCGAGATGTCTAACATCTCTGAC
ACAGGTTCAGAAACGAGTGACACAGTGAGCGAAAATAAGGCTGCGGCAGTTCCTCTTCCT
CAACGAAGATATAGCAAAGAAAATCATCATCACGTTGCGGATGGTAGTGGCGATGGCAAC
AGAAATGTGAAGGGGAAAAATGAAGCCACAAACAACAACTCGAACCGAAATAGATTCGAG
GCTTTGAATGGAGTTAAAGATAATTCAGGAGAAGATGTTATACAAAATGGTACGGAAAAA
GAAGTTAACGGAGTAAAAAACGACTCTGTGAATAACAGCAACGGCAAAGCGATCGTTCCA
CCAGCAGGTGCCAAAAGCAAAAAGAAAAACAGAAACAAAAACAAAAAATCCAAAGCGGCA
GAGATCGTCCAGAACGGTGAGACTGAAGAAAGTTTACCAACTCCTGCTGAAAACGGCAGT
GAGGATAAAGAAGTGGAACCAGCC
| ProSiteProfiles |
Agenet-like_dom (IPR008395) - T[6-50] 10.651 - T[64-115] 19.871 |
| SMART |
KH_dom (IPR004087) - T[218-285] 0.032 - T[286-358] 0.004 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[219-281] 4.3E-26 - T[282-361] 6.3E-23 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[220-286] 6.17E-10 - T[286-360] 8.05E-10 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[222-280] 3.2E-4 - T[286-353] 3.6E-10 |
| Pfam |
FXMRP1_C_core (IPR022034) - T[356-459] 2.1E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FXR1_HUMAN | 48.23 % | 417 | 2.74E-139 |
| FXR2_HUMAN | 52.48 % | 402 | 8.18E-133 |
| FMR1_HUMAN | 52.615 % | 342 | 6.4E-110 |