- Transcript 'Moocci.CG.ELv1_2.S58...' >
- Clone 'cien60278' >
- Transcript 'Boleac.CG.SB_v3.S206...' >
- Transcript 'KH2012:KH.C1.359.v1....' >
- Transcript 'Haaura.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S490.g05355.01.t
Possible name(s)
MLH1; PMS1; PMS2
Gene model
Location
S490 [29,174 / 35,539]
Amino acid sequence
Length: 575
>Haaura.CG.MTP2014.S490.g05355.01.p
MASCSNQPIIRRLEESVVNRIAAGEVVQRPANGLKEMLENSLDAGSTSITVTIKSGGLKM
LQISDNGHGIRREDMEIVCERFTTSKLREFNDLRSIATFGFRGKLKAPPRPTAGNQGTQI
TVEDLFFNVPARRRALTNFSEEHQKIADVVSRYAIHNSGISMMLRKAGQSNTAAGSISVR
THVGASVCDNIAAVYGSQIAKDLIEVVHDDERLQFKVSGYISNANCSSKKFNFLLFINHR
LVDCTSLKRALDTVYQAYLPKGSHPFVYLALEIPPCNVDVNVHPTKHEVHFLHEEEIVES
VQKAVDRKLLGCNSSRTFYTQTFLPTAPGVTVNDVIKEKNSKLAENQARIYEHQMVRTDS
KLQKLDAFIMKPSVMSPSSAGILSPKQQFLSKAQSPQLKHPKKNSEEHQEMCAKYSSPRL
HDPKLNSARIAKRRQIKLTSILKLQDEIKSNVQQDLVNLIGDHTWVGCINPEQALIQHST
KLFLSDTRRLSEELFYQILIFDFGNFGVLKFSQPIPIYDIALLALENGESGWKPADGNKE
DLAAHIAEFFKEKSEMLRDYFSFDVDEVNMYYVQ*
Nucleotide sequence
Length: 1,752
>Haaura.CG.MTP2014.S490.g05355.01.t
TTTTATTAAAAGTATAGTATTTTTAGTATGGCCAGTTGTAGCAACCAACCTATTATCAGG
CGCTTAGAAGAATCTGTGGTTAATAGGATAGCTGCAGGAGAAGTCGTTCAGCGTCCGGCA
AACGGTTTGAAAGAAATGCTCGAGAACAGTCTTGATGCAGGTTCCACATCCATTACTGTC
ACGATCAAATCCGGCGGTCTCAAGATGCTTCAAATATCTGACAATGGCCACGGTATTAGG
CGTGAAGATATGGAAATTGTATGCGAGCGATTTACCACTAGCAAATTACGAGAATTCAAT
GACCTGCGTTCCATTGCCACGTTTGGATTCCGTGGCAAACTAAAAGCCCCTCCCAGACCA
ACTGCTGGGAACCAAGGAACCCAGATAACAGTGGAAGACTTGTTTTTTAACGTACCTGCA
CGTAGAAGAGCACTCACTAATTTTTCTGAAGAGCATCAAAAAATTGCTGATGTTGTTAGC
AGGTATGCAATACATAACTCTGGAATATCCATGATGTTACGGAAAGCTGGTCAAAGTAAC
ACCGCTGCAGGGAGTATCAGTGTTCGTACTCATGTTGGTGCATCTGTTTGTGACAACATT
GCAGCCGTTTATGGTTCTCAGATCGCCAAAGATTTGATTGAAGTAGTCCACGATGATGAA
AGGCTTCAATTCAAGGTCTCCGGATACATCAGTAATGCAAACTGCTCTTCAAAGAAATTC
AATTTCCTTCTTTTCATTAATCATCGCCTGGTGGACTGCACGAGCCTCAAGCGTGCTCTT
GACACCGTCTATCAAGCCTATCTTCCTAAAGGAAGTCACCCGTTCGTTTATCTTGCTTTG
GAAATACCTCCTTGCAATGTTGATGTCAATGTTCATCCTACAAAGCATGAGGTGCATTTT
CTACATGAAGAAGAAATAGTAGAATCCGTGCAGAAGGCTGTAGATCGCAAGCTACTCGGC
TGCAATTCTTCGAGGACATTTTACACTCAGACATTCCTCCCGACCGCCCCAGGTGTAACA
GTGAATGATGTTATTAAAGAGAAAAATTCTAAATTAGCAGAAAATCAGGCGAGAATTTAT
GAACATCAGATGGTTAGAACGGATAGCAAACTGCAGAAGCTTGATGCTTTCATTATGAAA
CCATCTGTCATGTCACCGAGCAGCGCTGGAATACTGTCACCAAAACAACAGTTTCTGAGC
AAAGCACAGTCACCACAACTCAAACATCCTAAAAAGAACAGTGAAGAACATCAAGAAATG
TGTGCGAAATATAGCAGTCCTCGTCTCCACGATCCAAAGTTAAATTCTGCCAGGATTGCA
AAAAGAAGGCAGATCAAACTTACAAGTATTCTTAAACTTCAGGATGAAATCAAAAGCAAC
GTTCAGCAAGACCTCGTCAACCTAATAGGGGATCACACGTGGGTCGGTTGCATAAATCCA
GAACAAGCACTCATTCAGCACAGCACAAAACTGTTTCTGAGCGACACAAGAAGACTTTCC
GAAGAATTGTTTTATCAAATATTGATATTCGATTTTGGGAACTTCGGTGTACTGAAATTT
TCGCAACCAATTCCTATCTACGACATTGCTCTGCTTGCACTCGAAAATGGCGAGAGCGGA
TGGAAACCTGCAGATGGAAACAAGGAAGATTTGGCCGCACACATAGCGGAATTTTTCAAA
GAAAAATCTGAAATGCTCAGGGATTATTTCTCTTTCGATGTTGATGAGGTAAATATGTAC
TATGTTCAGTAA
| PANTHER |
DNA_mismatch_repair_MLH1 (IPR011186) - T[9-103] 4.1E-192 - T[103-404] 4.1E-192 - T[392-567] 4.1E-192 |
| Gene3D |
HATPase_C_sf (IPR036890) - T[9-104] 1.0E-37 - T[105-195] 1.6E-15 |
| SUPERFAMILY |
HATPase_C_sf (IPR036890) - T[10-196] 3.01E-37 |
| CDD |
HATPase_C (IPR003594) - T[34-85] 2.07476E-6 |
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[176-307] 1.63E-32 |
| Pfam |
DNA_mismatch_repair_C (IPR013507) - T[191-309] 3.8E-36 |
| SMART |
DNA_mismatch_repair_C (IPR013507) - T[191-310] 8.7E-49 |
| Gene3D |
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[196-322] 3.9E-49 |
| Pfam |
Mlh1_C (IPR032189) - T[437-568] 1.1E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PMS2_HUMAN | 29.363 % | 130 | 1.05E-31 |
| PMS1_HUMAN | 23.547 % | 99.8 | 7.85E-22 |
| MLH1_HUMAN | 50.238 % | 599 | 0 |