Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S4939.g10819.01.t

Possible name(s)

DNAJC27; RAB14; RAB37

Gene model

Haaura.CG.MTP2014.S4939.g10819

Location

S4939 [2,197 / 4,944]

Sequences

Amino acid sequence

Length: 162

>Haaura.CG.MTP2014.S4939.g10819.01.p
MSTTNPNFISRKKGHPRSIRVKVISMGNTEVGKSCLIKRYCEKRFVNKYLATVGIDYGVT
KVQVKDKELKVNIFDMAGHPYFYEVRNEFYKDTQAALLVYDVTNRTSFDCLESWMTEMRN
EIGRPQRMDDVIFIVCANKIDKGKRAVDSTEGHLWAEAKGF*

Nucleotide sequence

Length: 963

>Haaura.CG.MTP2014.S4939.g10819.01.t
ATGTCGACAACTAATCCTAATTTTATTAGTCGGAAGAAAGGACATCCGAGAAGTATCCGT
GTTAAAGTTATAAGCATGGGAAATACAGAAGTTGGTAAAAGTTGTTTAATCAAGCGTTAC
TGCGAAAAAAGGTTCGTCAACAAATATCTTGCGACCGTTGGCATTGATTATGGTGTCACA
AAAGTTCAAGTCAAAGATAAAGAATTAAAAGTTAATATTTTTGATATGGCCGGACATCCA
TACTTTTATGAAGTGCGTAACGAATTTTACAAAGACACACAAGCTGCATTGCTGGTTTAC
GACGTCACGAATCGAACTAGCTTTGATTGTTTGGAATCGTGGATGACAGAAATGAGAAAT
GAAATCGGACGACCGCAACGAATGGACGATGTAATATTTATTGTTTGTGCCAACAAGATT
GATAAAGGAAAAAGAGCTGTAGATTCAACAGAGGGACATTTATGGGCTGAAGCAAAAGGA
TTTTAATACTTTGAAACATCAGCAGCGACCGGTGAAGGTGTCAATGAAATGTTTCAGGCA
TTGTTTGATTCGCTTCTTGAAATCTCGGAGAGTGGTGGAAAGAAAGCTCCAGTCAACACG
AATGTCGGTTTCACACGAGAGCAAGCCGACGCCATCTTGAGGATAAAAAATGGACGAGAT
AATTATGAGAAACTGGGTGTTCACCATACTGCTACAAGAGAGGATGTCAACAAAGCGTAC
AGGAAGTTGGCCGTTCTTCTTCATCCTGATAAAAATATTGCTCCAGGAAGTGAGGATGCT
TTCAAGCTGCTTGTTAACGCTAGAACAGCGTTGCTCAAAAACAGATGAGGGAAATTCTTA
ATCACATATTCCCCACCCTACTCCAGGCCAGACGACCTGCATGTAATATGTAACACCCTC
ACTAAGTAGCCATATCCAAGGGGGCAATTAACCCTCTCCCCACCAGCCCTCTATTTTTAT
TAC

InterProScan

TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[20-158] 6.1E-21
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[20-161] 1.46E-35
Pfam	Small_GTPase (IPR001806) - T[22-160] 1.5E-33

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAB37_HUMAN	36.17 %	94.7	1.14E-24
DJC27_HUMAN	68.182 %	230	3.57E-77
RAB14_HUMAN	34.043 %	94.4	1.32E-24