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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S515.g05499.02.t

Possible name(s)

RPAP2

Location

S515 [1,629 / 4,664]

Sequences

Amino acid sequence

Length: 361

>Haaura.CG.MTP2014.S515.g05499.02.p
MEKNNMDDKNKLFTRKLDVQKEFETRKKAEKDAHIIVENLLQNNISEQLFLHSLKKITPD
HYADITEERSISGNCGYCLCNKNLSKMPSQQFKISRNKVYDITERKKFCSDSCFSISSQI
SNQIPSSPIWLRDIEKMADIKLPECISKSERLPGEEVTLRHVVSLDDVESHTDEDESGEL
DNITKEELTKEIIEKSSIRKSRSQASKSVTRSPQSRYLEALSILNDWITKATLQYLQILP
KECIDEQTKSQSSNSNWQDNHIQSRFASTPDTGRVSPPRQCEPQGNEKEFLNKVASYFKS
SLVIQERTVPKHNKNNEPAQKNKSEMVLPTVDTANQEKSFLIGKAFIIHFQQHLPNKYTW
*

Nucleotide sequence

Length: 1,177

>Haaura.CG.MTP2014.S515.g05499.02.t
ATGGAAAAAAATAATATGGACGACAAAAATAAATTGTTCACGAGAAAACTGGATGTTCAG
AAAGAATTTGAAACGAGAAAGAAGGCGGAAAAAGATGCTCACATCATTGTAGAGAATCTG
TTGCAAAACAACATTTCAGAACAACTGTTTTTACATTCACTGAAGAAAATTACACCAGAC
CACTATGCAGATATCACTGAAGAACGTTCGATTTCTGGAAATTGTGGATACTGCTTGTGT
AACAAAAATCTTTCCAAAATGCCATCACAGCAATTTAAAATCAGCCGCAACAAAGTGTAT
GATATTACAGAAAGGAAAAAGTTCTGTAGCGATTCCTGCTTTTCTATCTCCAGCCAAATA
TCTAACCAAATTCCATCTTCACCAATATGGCTGCGGGATATTGAAAAGATGGCAGATATA
AAATTACCAGAATGTATTTCCAAATCTGAGCGACTTCCTGGCGAAGAAGTAACTCTGAGG
CATGTTGTTTCTCTGGATGATGTTGAAAGCCATACCGATGAAGACGAATCTGGCGAACTA
GACAACATTACAAAGGAAGAATTGACAAAAGAGATTATTGAAAAATCCAGTATTCGTAAA
TCTAGAAGTCAAGCCAGTAAATCTGTCACTAGATCACCACAATCGAGGTATCTTGAAGCC
CTCTCAATTTTGAACGACTGGATCACAAAGGCAACTCTGCAATATCTTCAAATATTGCCC
AAAGAATGCATTGATGAGCAGACAAAATCACAGAGTTCAAATAGCAATTGGCAAGACAAT
CATATACAATCACGGTTTGCCTCAACTCCAGATACTGGAAGAGTGTCGCCACCACGACAA
TGTGAACCACAAGGAAATGAAAAAGAATTCTTGAATAAGGTCGCTAGTTATTTCAAGAGC
AGTTTGGTTATACAAGAAAGAACGGTGCCGAAACACAACAAAAATAACGAGCCTGCACAA
AAGAATAAGTCTGAAATGGTGTTGCCTACAGTGGACACTGCTAACCAGGAAAAAAGTTTT
TTAATTGGCAAAGCATTTATAATTCATTTTCAGCAACATCTTCCAAACAAATACACTTGG
TGAAATTTTTATAGCAACCTGGCAAGAACGACGTATTTCTATCAATAGCTATGTCACATA
TACAACTTATTCATCACTTTAAGGTGTTGCAGTCTGA

InterProScan

Gene3D
Rtr1/RPAP2_sf (IPR038534) - T[6-165] 4.2E-30
ProSiteProfiles
Rtr1/RPAP2 (IPR007308) - T[52-133] 20.385
Pfam
Rtr1/RPAP2 (IPR007308) - T[57-124] 3.5E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPAP2_HUMAN 44.615 % 120 4.15E-30