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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA39YA17' > 
  2. Clone 'AHC0AAA90YO02' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Clone 'AHC0AAA213YM03' > 
  5. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S516.g05507.01.t

Possible name(s)

DLG4; GRIP1; GRIP2

Gene model

Haaura.CG.MTP2014.S516.g05507

Location

S516 [19,142 / 26,048]

Sequences

Amino acid sequence

Length: 1,034

>Haaura.CG.MTP2014.S516.g05507.01.p
MPFKRPVCLASPDTADDKESSKENDLQIVPVQEVEIPELERGSCRVILHKKEKVGLGLTI
AGGKDKDSRPKVSNMRSGGIASMCDRLQVGDYITAVNGIRTSKMKHAEVISLLKNVGETV
TLDIEYHLPPITVCTASITQKSVDVILKTETNSSFGFVLRGGFHSDRMKSRSHVVTFIRE
GSYTDKESVLKAGDRIKFINSKPIHNATLEEAYELVEKFPDECTFTIEYDVSVMDAVKNA
SGPLLVEVSKAAGSNLGVVLTVSMHNGKHCICIGGITPASIAERCGALNVGDRILSVDGI
TLDMSTMSLQDSEDFLKSSSDHIRLEILPVSQALRAIKYPTALSSARSLSALNSSSYMHP
HAMSTSSTLYRDGPSSRWARRRNFSRYCSSAVSLASKDYCSSNQVVHAETVEVSLLMADD
DIMLGNMHSACFGIQLQGGVFATEVLISPPSIASIESGSPAEKCGLIQSGDRLVSVNGCN
TENETLAEVNQMLQDALEIGQVYLVIEFDVAESVVPSCGTFHVKLPKRKNMELGIVINTA
GPSKEPLYISEVKQGSVAHRTGILQAGDRLLAIDGMKLDATSTVEDAMALLNCAENVVRL
KIKKEDDYSDGEGANAPIIYTVELKKNGGSLGITIAGNEDIMHPIVISGIIPNGVAAKTG
AIHKGDQILSINKISLKKKPLSEAVRLLQTAGDTVALKIKKSPHDASHSSSPGFSNLEEE
DIQNNSSEKQSSSQENLLSPETDRSQGDSPSRNTSSIAGGETTDVDYKSVGRIAPAGASS
AETSKSWEKTGQDSSLTPDNYMRMEKMFQDTRSEYGAGLRHSETWGPRYHNRFRMRQQQQ
SNNVYPTNDWQKALEGLQSVGQSSEIMKDLEESIMSTSKLNISDSAVMDTRPHFQQTRSV
SMSRMEPQIKQAVPSMLPLGPSVQLFKVTLVKSNKFENFGFSLSDGQLEHGVFVHSTHQG
GPAYKAGLRPYDRILQVNGVPTREFDCRQAIPLLTRSGNFIELVIARNPCVSVARHQLPL
LAPPIDVPSFLYK*

Nucleotide sequence

Length: 3,102

>Haaura.CG.MTP2014.S516.g05507.01.t
ATGCCGTTCAAGAGGCCGGTTTGTTTGGCATCTCCAGACACTGCAGATGATAAAGAGTCT
TCGAAAGAGAATGATCTGCAGATTGTTCCTGTTCAAGAAGTGGAGATCCCTGAACTTGAA
CGTGGATCATGCAGAGTTATTTTGCACAAGAAAGAAAAAGTTGGACTTGGACTGACGATA
GCCGGTGGAAAAGACAAAGACAGTCGACCAAAAGTATCTAACATGCGTAGCGGAGGTATT
GCTTCAATGTGTGATCGACTGCAGGTCGGAGATTATATAACGGCCGTCAACGGAATACGA
ACAAGTAAAATGAAACATGCCGAAGTTATAAGCTTGCTAAAAAATGTTGGTGAAACCGTG
ACACTGGACATTGAGTATCATTTACCTCCTATAACCGTTTGTACTGCGAGCATTACACAG
AAATCTGTGGATGTTATTTTGAAGACAGAAACTAACTCATCCTTCGGCTTTGTGCTCCGT
GGTGGATTTCATTCAGACAGGATGAAATCAAGGTCGCATGTTGTTACGTTTATTCGAGAA
GGAAGTTATACTGACAAGGAAAGCGTACTCAAGGCCGGAGACAGAATAAAATTCATCAAT
TCCAAACCAATTCACAATGCAACTCTTGAGGAGGCTTATGAACTGGTAGAAAAATTTCCT
GATGAATGTACCTTCACGATTGAATATGATGTGTCAGTAATGGATGCTGTTAAGAATGCT
TCAGGTCCTCTGTTAGTGGAAGTTTCCAAGGCAGCAGGCTCTAATCTTGGTGTGGTTCTC
ACAGTATCTATGCACAATGGAAAACACTGCATTTGTATAGGTGGTATAACACCAGCAAGT
ATTGCAGAAAGGTGCGGTGCTTTAAATGTTGGAGATCGTATTCTCTCTGTTGATGGTATC
ACCCTGGATATGTCAACAATGTCATTGCAGGATTCAGAAGATTTCTTGAAGTCTTCTTCG
GATCATATCAGACTGGAAATTCTTCCTGTTTCCCAAGCGCTACGAGCAATCAAATATCCA
ACAGCTTTATCGAGTGCTAGGTCATTATCTGCATTGAATAGTTCAAGTTATATGCATCCA
CATGCCATGTCCACGTCATCAACATTGTACAGAGATGGTCCAAGCTCACGATGGGCTAGG
AGGAGGAATTTTTCACGATACTGCAGTAGCGCTGTTTCTTTGGCATCGAAAGATTATTGC
AGCAGTAATCAAGTGGTTCATGCAGAAACTGTTGAAGTTTCTCTTCTAATGGCGGACGAT
GATATAATGTTAGGAAATATGCATTCAGCTTGCTTTGGCATACAACTCCAAGGTGGAGTA
TTTGCAACAGAGGTCTTGATTTCTCCCCCGAGTATAGCATCTATTGAAAGCGGAAGCCCA
GCTGAAAAGTGTGGACTGATCCAGTCAGGTGACAGATTAGTATCAGTGAATGGTTGCAAT
ACAGAAAATGAAACTTTGGCGGAAGTTAATCAAATGCTACAAGATGCGCTGGAAATTGGA
CAGGTATATTTGGTCATTGAATTTGATGTAGCAGAATCTGTCGTGCCAAGCTGTGGAACG
TTCCATGTCAAACTTCCAAAGAGAAAGAATATGGAGTTGGGTATTGTAATCAACACTGCA
GGTCCTTCCAAAGAACCGTTATACATTTCTGAAGTGAAACAAGGCTCTGTTGCTCACAGA
ACAGGCATCTTGCAAGCGGGAGATCGCCTCTTGGCAATAGATGGTATGAAATTAGATGCA
ACATCTACTGTCGAAGATGCTATGGCTCTTTTGAATTGTGCTGAGAATGTTGTCAGGTTA
AAAATCAAGAAAGAAGATGACTATTCTGATGGGGAAGGAGCAAATGCTCCTATTATCTAT
ACGGTGGAACTAAAGAAAAATGGAGGAAGTCTCGGTATCACAATAGCTGGAAACGAGGAC
ATAATGCATCCCATTGTCATTTCTGGTATCATACCTAATGGCGTTGCTGCTAAAACTGGT
GCAATCCATAAGGGAGATCAGATACTCAGTATAAATAAGATTTCATTGAAAAAAAAACCT
TTGAGTGAAGCTGTGAGGTTGTTGCAGACCGCGGGTGACACAGTAGCATTAAAAATCAAG
AAGTCTCCACATGACGCTTCACATTCTTCTTCACCCGGTTTCAGTAACCTTGAAGAGGAA
GATATTCAGAATAACTCTTCAGAAAAGCAGTCTAGCAGTCAAGAAAACTTGCTGAGTCCT
GAGACTGACCGATCTCAAGGAGATTCTCCTTCAAGGAACACGTCTTCCATCGCTGGAGGA
GAGACGACTGATGTTGATTACAAAAGCGTGGGACGTATTGCACCTGCCGGTGCCTCCAGT
GCCGAAACATCAAAGTCGTGGGAGAAAACGGGCCAGGACAGCTCACTTACACCTGACAAT
TATATGAGAATGGAAAAAATGTTTCAAGACACTCGTTCAGAATATGGAGCAGGTCTTAGA
CATTCAGAAACTTGGGGACCGAGGTACCATAATCGATTCAGGATGCGACAGCAACAACAG
AGCAATAATGTTTATCCAACCAACGATTGGCAAAAAGCTCTGGAGGGTTTGCAGTCTGTT
GGGCAATCTAGTGAGATTATGAAAGATCTTGAGGAATCCATAATGAGCACCAGTAAACTG
AACATATCTGATAGTGCGGTGATGGATACCAGACCTCATTTTCAACAAACTAGAAGTGTG
AGCATGTCCAGAATGGAACCTCAAATAAAGCAAGCAGTGCCTTCCATGTTACCTCTCGGA
CCATCAGTGCAATTATTCAAGGTTACACTGGTGAAAAGCAATAAGTTTGAAAACTTCGGA
TTTTCTTTATCCGATGGCCAGCTGGAGCATGGAGTGTTTGTCCATTCAACTCATCAAGGT
GGGCCTGCATACAAAGCTGGTCTAAGGCCCTATGACAGAATTCTGCAGGTTAATGGAGTG
CCGACTCGAGAATTTGATTGCCGCCAAGCCATCCCTCTTCTGACTCGTTCAGGAAACTTT
ATTGAACTCGTAATTGCGAGAAACCCGTGCGTGTCAGTGGCGAGGCATCAACTGCCTTTG
CTGGCTCCACCAATCGACGTGCCAAGCTTTTTATACAAGTAA

InterProScan

PANTHER
GRIP2 (IPR030029) - T[24-340] 4.7E-253 - T[372-1019] 4.7E-253
SUPERFAMILY
PDZ_sf (IPR036034) - T[37-134] 2.5E-22 - T[128-230] 2.97E-14 - T[230-333] 1.73E-15 - T[429-507] 6.57E-15 - T[506-607] 6.05E-16 - T[617-703] 2.76E-23 - T[912-1011] 1.97E-20
ProSiteProfiles
PDZ (IPR001478) - T[45-128] 17.973 - T[144-231] 13.772 - T[245-331] 15.903 - T[412-496] 12.908 - T[522-606] 16.446 - T[621-703] 20.104 - T[927-1009] 17.551
Pfam
PDZ (IPR001478) - T[46-125] 3.0E-12 - T[145-227] 6.2E-7 - T[247-328] 1.5E-8 - T[432-506] 4.0E-8 - T[523-603] 5.9E-11 - T[622-700] 2.2E-14 - T[929-1005] 8.3E-11
SMART
PDZ (IPR001478) - T[54-128] 8.7E-16 - T[153-231] 2.3E-6 - T[254-331] 9.5E-11 - T[430-510] 2.7E-11 - T[531-606] 3.1E-13 - T[629-703] 3.6E-19 - T[937-1009] 3.3E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GRIP1_HUMAN 42.081 % 728 0
GRIP2_HUMAN 41.509 % 679 0