Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S5256.g10883.02.t

Possible name(s)

XPO1

Gene model

Haaura.CG.MTP2014.S5256.g10883

Location

S5256 [230 / 4,190]

Sequences

Amino acid sequence

Length: 472

>Haaura.CG.MTP2014.S5256.g10883.02.p
IVSDLLGLCEQKRGKDNKAIIASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDG
VQDMACDTFIKIAQKCRRHFVQIQAGEVMPFIEEILNNISTIICDLQPQQVHTFYEAVGY
MISAQTDTNVQEHLIEKYMMLPNQVWDSIIQQATKNVDVLKDPATVKQLGSILKTNVRAC
KSVGHYFVLQLGRIYLDMLNVYKCLSENISAAIKQQGEGVMKQPLIRSMRTVKKETLKLI
SGWVSRSNDPDMVNENFIPPLLEAVLMDYQSNVPAAREPEVLSTIATIVHKLEGAITQEI
PQIFDAVFECTLEMINKDFEEFPEYRTNFFLLLQAVNNHCFPALLAIPPAQFKLVLDSII
WAFKHTMRNVADTGLNILHQLLQNILQEKQASQSFFQTYFTDILQHVFSVVTDTSHTAGL
TMHATILAYMFSLVEQGRIVVPLHPDASDNVAFVHEYVANLLKTAFPHLQE*

Nucleotide sequence

Length: 1,431

>Haaura.CG.MTP2014.S5256.g10883.02.t
ATTGTTTCAGATCTTCTTGGACTTTGCGAACAGAAACGAGGCAAAGATAATAAAGCGATT
ATCGCTTCAAACATCATGTATGTTGTCGGCCAATATCCCAGATTTCTCAGAGCTCACTGG
AGATTCCTGAAAACTGTTGTCAATAAATTGTTTGAGTTTATGCACGAGACACACGATGGC
GTGCAAGATATGGCTTGCGACACATTCATAAAAATCGCTCAGAAGTGCCGCCGTCATTTC
GTGCAGATACAAGCCGGGGAAGTGATGCCGTTTATTGAAGAAATCTTGAATAATATAAGC
ACGATTATATGTGATCTACAACCACAGCAGGTTCATACATTCTATGAAGCAGTCGGATAC
ATGATCAGTGCACAGACAGATACAAATGTTCAAGAACATTTGATTGAAAAATACATGATG
TTACCGAATCAAGTATGGGATAGTATCATACAACAAGCGACGAAAAACGTCGATGTATTG
AAAGATCCGGCGACTGTCAAACAACTAGGAAGTATTTTGAAAACAAATGTGAGAGCGTGT
AAAAGTGTCGGACATTACTTCGTGCTACAGCTCGGACGTATTTATCTCGATATGCTGAAC
GTTTACAAATGTTTGAGCGAGAATATCTCTGCTGCCATCAAGCAGCAAGGTGAAGGAGTT
ATGAAACAACCTTTGATACGAAGCATGCGAACAGTAAAGAAAGAAACATTAAAACTTATC
TCCGGATGGGTCAGTCGATCAAATGATCCGGATATGGTGAACGAGAATTTCATTCCACCT
CTGCTTGAAGCTGTATTAATGGATTATCAATCGAATGTTCCGGCAGCTCGAGAACCGGAA
GTTCTGAGTACAATAGCAACAATAGTTCATAAGTTAGAGGGAGCAATAACACAAGAAATA
CCGCAGATATTTGATGCTGTATTCGAATGTACGCTCGAAATGATCAACAAAGATTTTGAA
GAATTTCCAGAATACAGAACAAATTTCTTTTTATTATTACAAGCTGTCAACAATCACTGC
TTCCCTGCTCTTCTTGCTATTCCTCCTGCACAATTTAAACTTGTTCTCGATTCAATCATT
TGGGCTTTCAAGCATACAATGAGGAATGTCGCTGATACAGGTTTGAATATTCTTCATCAG
CTGTTGCAGAACATTTTGCAAGAAAAGCAAGCGTCGCAAAGTTTCTTTCAAACATACTTC
ACAGATATATTACAGCATGTGTTCAGTGTTGTTACAGATACTTCACATACTGCTGGTCTC
ACAATGCATGCAACCATCCTTGCATACATGTTCAGTTTGGTCGAGCAAGGACGTATCGTG
GTTCCACTACATCCAGATGCCTCTGACAACGTTGCATTCGTTCATGAATATGTCGCAAAT
TTATTAAAGACTGCTTTCCCACATCTTCAAGAGTAAGTTATTAATCATTTT

InterProScan

Gene3D	ARM-like (IPR011989) - T[1-184] 1.2E-84 - T[186-471] 2.3E-129
SUPERFAMILY	ARM-type_fold (IPR016024) - T[188-470] 3.63E-105
Pfam	CRM1_C_dom (IPR014877) - T[190-470] 2.9E-117
SMART	CRM1_C_dom (IPR014877) - T[190-471] 6.2E-169

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
XPO1_HUMAN	84.746 %	848	0