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TRANSCRIPT CARD

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  1. Transcript 'Mooccu.CG.ELv1_2.S49...' > 
  2. Transcript 'KH2012:KH.L96.81.v1....' > 
  3. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  4. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S5388.g10907.01.t

Possible name(s)

SELENOT

Gene model

Haaura.CG.MTP2014.S5388.g10907

Location

S5388 [699 / 1,332]

Sequences

Amino acid sequence

Length: 195

>Haaura.CG.MTP2014.S5388.g10907.01.p
FSCRIKSGYYMDRLTFFVVVTTAMFVVKDLSSSTEVAAQPDSDDIPVRSLRNKFATPVLK
FLIISQRYSDLKIEAGNYPPPKAYQTIASLISLFKFVFIGCILTGTNPFPYFGIETPPFY
IWCKENMLYATMMVFFVSNAIETQLVSTGAFEIILNDITVWSKLQSGRIPRVDELLQIIE
SQMKGSGNFESIHG*

Nucleotide sequence

Length: 585

>Haaura.CG.MTP2014.S5388.g10907.01.t
TTTTCCTGCCGAATAAAGTCAGGCTACTACATGGATCGTTTAACTTTCTTTGTTGTTGTG
ACTACTGCAATGTTTGTGGTAAAGGATTTGTCATCCAGTACTGAAGTAGCGGCTCAACCC
GACTCTGATGACATTCCAGTGAGAAGTCTTCGCAACAAATTTGCTACACCGGTTCTGAAA
TTTCTAATAATCAGTCAACGTTACTCAGACCTCAAGATCGAAGCAGGGAATTACCCTCCC
CCCAAAGCCTATCAAACTATTGCTTCACTGATTTCTTTATTCAAATTTGTTTTTATTGGA
TGTATTTTAACTGGAACCAATCCTTTCCCATATTTTGGAATAGAAACTCCGCCATTTTAC
ATATGGTGCAAAGAAAATATGCTATATGCCACCATGATGGTTTTTTTTGTATCGAATGCT
ATCGAAACTCAACTTGTGTCGACCGGTGCATTTGAAATTATCCTCAACGACATAACAGTT
TGGTCAAAACTTCAGTCAGGTCGTATACCACGGGTTGATGAACTTTTGCAGATTATTGAA
TCCCAAATGAAAGGAAGTGGAAACTTCGAAAGTATTCATGGTTAA

InterProScan

PANTHER
Selenoprotein_T (IPR019389) - T[11-37] 1.9E-50 - T[63-191] 1.9E-50
TIGRFAM
Selenoprotein_Rdx-typ (IPR011893) - T[64-180] 2.1E-14
Pfam
Selenoprotein_Rdx-typ (IPR011893) - T[139-180] 3.8E-9
SUPERFAMILY
Thioredoxin-like_sf (IPR036249) - T[147-186] 1.32E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SELT_HUMAN 44.134 % 157 8.36E-49