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TRANSCRIPT CARD

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  1. EST 'AV675090' > 
  2. Clone 'ciad013j10' > 
  3. Region 'REG00000511' > 
  4. Clone 'citb092j13' > 
  5. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S538.g05622.01.t

Possible name(s)

FAT4; NOTCH1; NOTCH3

Gene model

Haaura.CG.MTP2014.S538.g05622

Location

S538 [29,610 / 31,087]

Sequences

Amino acid sequence

Length: 457

>Haaura.CG.MTP2014.S538.g05622.01.p
MNPVTEKKCLNGGWCKSGDAMHGCSRCQCQPGYVGKYCETNVNECLMMPCANGGKCFDLS
NDFYCECARGFTGRYCNDEIDECSLKPDLCYNGGTCVNTFGSYECVCPSGYSGKQCDDKK
RPRYTAETPKPILIPAITKIMTTRSSTTIEITESTTRTTTSPKRSTETTVTKSANRRKPQ
LVPVVNKPKVKMTRITHEVKITPMDSQYSAANNELVIRQEQPINSDSVDTSAQAMQVMTF
VFMGLAIVILAAILVLVWMRCYSTHSGAKNNSDGVCHAPQGVSVISSVEREIQNNRQSLY
DPVHLNEPNEIQKSLVYQSMIPTTTTTTTTTTQDDQSLRVQIDNSEQEYMQRERRIAPSR
PVSSHIVTSCPSPPPPYQIKPEDISHSRKNLRPVSGYYVALPPTSSRPQSSHHPSSHDQC
YRNSMGAAYSSFAEDQEEMRSLLFTDNSIASNGIIV*

Nucleotide sequence

Length: 1,371

>Haaura.CG.MTP2014.S538.g05622.01.t
ATGAATCCGGTTACGGAAAAGAAATGTTTGAATGGTGGATGGTGCAAGTCTGGCGATGCA
ATGCATGGATGCAGCAGATGCCAATGTCAACCTGGTTACGTCGGAAAATATTGTGAAACT
AACGTGAACGAATGCTTGATGATGCCATGTGCTAACGGTGGAAAATGTTTCGATTTGTCT
AATGACTTCTACTGCGAATGTGCTCGTGGATTTACAGGTCGTTACTGTAATGACGAAATA
GACGAATGTTCTTTGAAACCAGACCTCTGTTATAACGGTGGAACCTGTGTGAACACCTTC
GGGTCCTACGAATGTGTTTGTCCAAGTGGATACTCCGGAAAACAATGCGATGATAAGAAA
CGACCCAGGTACACTGCTGAAACACCGAAGCCTATCCTCATTCCCGCCATTACAAAAATT
ATGACGACACGTAGCAGCACTACAATTGAAATTACCGAATCGACAACACGTACAACCACG
TCACCTAAACGATCCACTGAGACCACTGTTACTAAGAGTGCCAACCGAAGGAAACCACAG
CTTGTGCCTGTAGTCAATAAACCGAAAGTGAAGATGACTCGTATCACACACGAGGTCAAG
ATCACTCCGATGGATAGCCAATACTCTGCGGCCAACAACGAACTCGTGATCCGGCAAGAG
CAACCAATAAATTCCGATAGCGTCGATACGTCAGCGCAGGCTATGCAGGTCATGACTTTC
GTATTCATGGGGCTGGCGATCGTTATTCTTGCCGCTATACTTGTGCTGGTTTGGATGAGA
TGTTATTCTACACATTCAGGGGCTAAAAATAACAGTGACGGAGTTTGTCATGCACCTCAG
GGAGTGTCTGTGATTTCTTCCGTTGAAAGAGAGATCCAGAATAACAGGCAATCCTTATAC
GATCCTGTACATTTGAATGAACCAAATGAAATACAGAAATCACTGGTCTATCAATCAATG
ATACCAACCACAACAACAACAACAACTACAACAACTCAAGATGATCAAAGTCTACGCGTT
CAAATCGACAATAGCGAGCAAGAATACATGCAAAGAGAGCGACGTATTGCGCCATCTAGA
CCAGTGTCATCACACATCGTTACATCATGTCCGTCTCCTCCTCCACCGTACCAAATCAAA
CCTGAAGATATTTCACATTCGAGAAAAAATCTTCGACCAGTTTCCGGGTATTACGTAGCA
CTTCCTCCTACGTCATCAAGACCACAATCGTCACATCACCCATCTTCACACGATCAGTGC
TATCGTAACTCAATGGGCGCGGCTTACTCCTCTTTTGCAGAAGACCAAGAAGAAATGAGG
TCCCTGCTATTTACAGACAATTCTATTGCCAGCAACGGAATCATTGTATAA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[1-39] 9.193 - T[41-77] 21.621 - T[79-117] 22.364
SMART
EGF-like_dom (IPR000742) - T[14-39] 51.0 - T[44-77] 1.0E-5 - T[82-117] 9.2E-7
SUPERFAMILY
Growth_fac_rcpt_cys_sf (IPR009030) - T[14-118] 9.57E-11
ProSitePatterns
EGF-like_CS (IPR013032) - T[27-38] . - T[27-38] . - T[65-76] . - T[65-76] . - T[105-116] . - T[105-116] .
SMART
EGF-like_Ca-bd_dom (IPR001881) - T[41-77] 8.7E-9 - T[79-117] 3.7E-12
Pfam
EGF-like_dom (IPR000742) - T[45-75] 2.9E-8
ProSitePatterns
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[56-67] . - T[96-107] .
ProSitePatterns
EGF_Ca-bd_CS (IPR018097) - T[79-105] .
Pfam
EGF-like_Ca-bd_dom (IPR001881) - T[80-116] 1.6E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOTC3_HUMAN 44.348 % 108 4.34E-25
FAT4_HUMAN 49.451 % 107 1.06E-24
NOTC1_HUMAN 44.068 % 109 2.27E-25