- Clone 'CCTU2910' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S5459.g10918.01.t
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
S5459 [2,035 / 3,892]
Amino acid sequence
Length: 354
>Haaura.CG.MTP2014.S5459.g10918.01.p
MCRGQNIPKALRYINKIAFNLFKFRPVTGSTFSIPHVTDSAHAKSEKSDNLSNCSGSPRD
EDKKKREEDGTKNRQRTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLAQILKLTST
QVKIWFQNRRYKCKRQRQDKTLELASACPPRRVAVPVLVRDGKPCLGSPTGHMNGTHQLN
PYSAPYNVTVTPYHNYPSSYSSCGYNSYHHPHNPAASYTAAYGSAAATAGYNTLSGAAMS
AGMGGVGGLPGSALHHHQSATVGVAPSHFSAMQGQVQQGASIRNHSTSDYMYKLGLLKTV
NSLTHIIRRTCSNAYSSKRNNIYPIYRALNLIEISSTIRRSPVKTQRLFSGNSG
Nucleotide sequence
Length: 1,062
>Haaura.CG.MTP2014.S5459.g10918.01.t
ATGTGTCGCGGGCAGAACATACCGAAAGCTCTTCGCTATATTAATAAAATCGCTTTTAAT
TTATTTAAATTCCGTCCGGTCACAGGGTCGACGTTTTCGATACCGCACGTTACCGACTCT
GCTCACGCGAAATCCGAGAAATCTGACAACCTGAGCAATTGCAGTGGAAGTCCCAGAGAC
GAAGACAAAAAGAAACGCGAAGAAGACGGTACCAAGAACCGTCAACGTACTAGGCGAAAA
CCGAGGGTACTCTTCTCCCAAGCACAGGTTTTCGAACTGGAAAGAAGATTTAAACAACAG
CGATATCTTTCAGCACCAGAACGCGAACACCTCGCGCAGATATTAAAGCTAACTTCGACC
CAGGTCAAAATTTGGTTTCAAAATCGTCGTTACAAATGCAAGAGGCAAAGACAGGACAAA
ACCCTTGAACTGGCGAGCGCATGTCCCCCACGTCGTGTCGCGGTTCCTGTCCTGGTACGG
GATGGTAAACCGTGCCTTGGAAGTCCAACGGGTCACATGAACGGCACGCATCAGTTGAAC
CCGTACTCGGCCCCCTACAACGTCACAGTAACCCCCTATCACAATTACCCAAGTTCGTAC
AGCTCTTGCGGATACAATTCGTATCATCACCCGCATAATCCTGCAGCGAGTTATACTGCA
GCATACGGTTCTGCTGCTGCCACTGCGGGGTATAACACTCTATCCGGAGCAGCGATGAGT
GCTGGAATGGGAGGGGTCGGTGGGTTACCTGGATCAGCACTCCATCATCACCAATCAGCA
ACGGTCGGTGTAGCACCTTCGCATTTTTCCGCGATGCAAGGCCAAGTGCAACAGGGCGCG
AGTATAAGGAACCATTCGACATCGGATTATATGTATAAATTAGGACTTTTGAAGACCGTG
AACTCTCTTACCCACATCATCAGACGAACGTGCTCGAACGCTTACTCGAGTAAGAGGAAT
AATATCTATCCCATTTATAGAGCTTTGAATCTCATAGAAATTTCCAGTACTATTCGGCGC
TCACCTGTTAAAACTCAGCGCTTATTTTCGGGAAACTCCGGT
| PANTHER |
NKX-2.5 (IPR033629) - T[30-230] 3.4E-78 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[73-137] 1.5E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[76-136] 20.309 |
| SMART |
Homeobox_dom (IPR001356) - T[78-140] 4.0E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[79-135] 6.3E-20 |
| CDD |
Homeobox_dom (IPR001356) - T[79-137] 1.37879E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[100-111] 2.4E-6 - T[115-125] 2.4E-6 - T[125-134] 2.4E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[111-134] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 60.241 % | 181 | 1.59E-54 |
| NKX25_HUMAN | 51.429 % | 164 | 6.7E-48 |
| NKX23_HUMAN | 68.939 % | 157 | 6.88E-45 |