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TRANSCRIPT CARD

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  1. Region 'REG00001581' > 
  2. Region 'REG00001214' > 
  3. Transcript 'KH2012:KH.C10.87.v3....' > 
  4. Clone 'cies006g20' > 
  5. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S545.g05658.01.t

Possible name(s)

PRDM16; ZBTB48; ZNF598

Gene model

Haaura.CG.MTP2014.S545.g05658

Location

S545 [24,163 / 30,690]

Sequences

Amino acid sequence

Length: 1,002

>Haaura.CG.MTP2014.S545.g05658.01.p
MEANKNTENKPVKYKGQYKKSKGGQQLRQFTPRKRVSECEDDGTCDLCALPIEIYGIGSC
DHPICYRCSAKMRILCEQTHCAVCRVEMKKIIYCKVKMRFEVASQLKSAKPDKSNNWFTD
EEVKKKYKKLFQHTCGSCPDRDPDFTFDLLQVHVRKVHQRFFCDICVKYNKNFTEEYKTY
TRETLARHRRMGDEDDTSHRGHPICEYCDLRYLDSDSLLRHLRLDHYFCHFCDQLGSNQY
YGEYKDLRVHFRKGHFLCEIDECVDEQFTSVFPTELDLKAHRAAVHSRNLNKQQQKADRN
IDLGFQYARPPGRGGRGIGISSDIGRGRGGRGRGRARDEDLELAKALSLQEISNKEPNRS
GRPTVERPQTKTRDPEPPRDSPVESPNPLNLAEDFPGLGASVYKPPPVTSGTYLSDIASD
PPAVTSVAPSNTTAVKLAAAVGRSTGSFSKEEDFPSLGSSKVRQQSSGVWGGTPLAGPQG
SGSRPRTKKKSNAPSMPVSVNVPQPVMGSRSRIDVKDSEQFPSLGKGANLPLSISSGWVQ
TPTVHPKRTYNVSKAKNLVSQEPVRNTFQAKPTKSKISTGNSDNIVQDEIISVRQGFGKH
GMQITMIKQSEEISGIERPVELPSSGAGSMSIKTVDPATFSLLSGQRMDRASQNSGFDHF
MAEGNEFPELGGGARNNSRVKGFGISKTEGTTLQSNWKQDSRQQNKKKIVSLAEISNDIF
PSSKVDTISALERPKKKHSQQERVKKTEKNISTAPKSNLTESRRSNPDIQLKSNFATDDF
PSLGNPQGNELSSSPNWYEEEELKVADKVIKMNNFQMEENEFPSLGGVGSATRNQTKKGK
KKKKNKNAQSATEVSKHFKGAYVDTSQNGELTGNGQHNIFVSNGGSGKNKDQLDDGQQYA
EDMNDDIYISLMDQKPSKKDIDGRNEWLFNAIELLCGTDKKYSDFKTASAKYRRGTISGN
EYYKTCRTLLGKRYFSEVFTELVDLLPDQDKQEELTQIHVP*

Nucleotide sequence

Length: 3,006

>Haaura.CG.MTP2014.S545.g05658.01.t
ATGGAAGCCAACAAGAATACCGAAAACAAACCAGTTAAATATAAAGGCCAGTACAAGAAG
AGCAAAGGAGGTCAACAGCTGAGACAGTTCACGCCGAGGAAACGTGTCAGTGAATGCGAA
GATGACGGAACGTGCGATCTTTGTGCTCTTCCTATCGAAATATATGGGATAGGTTCTTGC
GATCATCCGATATGCTACCGCTGTTCGGCGAAAATGAGGATCCTTTGTGAGCAAACCCAT
TGTGCGGTCTGTCGAGTCGAGATGAAAAAGATCATTTACTGTAAGGTAAAAATGAGATTT
GAAGTTGCAAGCCAATTGAAGTCAGCCAAACCAGATAAATCAAACAACTGGTTTACGGAC
GAAGAAGTAAAGAAAAAGTATAAAAAACTATTCCAACATACATGCGGCTCGTGTCCAGAT
CGCGACCCCGACTTCACTTTTGATTTACTGCAGGTTCACGTTAGAAAAGTGCATCAGCGG
TTTTTCTGTGATATTTGTGTCAAATATAATAAGAATTTCACAGAGGAATACAAAACTTAT
ACTCGTGAAACTCTGGCTAGACACAGGAGAATGGGAGATGAAGATGACACCTCTCATCGT
GGGCATCCGATATGCGAATATTGCGATCTTCGTTACTTAGACAGTGATTCCCTTCTTCGT
CACTTGAGATTAGATCATTACTTTTGTCATTTCTGTGATCAACTTGGATCTAATCAATAT
TATGGGGAGTATAAGGACTTGAGGGTGCATTTTCGCAAGGGCCATTTCCTCTGTGAAATT
GATGAATGTGTGGATGAACAGTTCACATCTGTATTTCCGACAGAGCTCGACCTAAAGGCT
CATAGAGCTGCTGTTCACAGCAGAAATCTTAACAAACAGCAACAGAAGGCAGACAGGAAC
ATTGATCTTGGTTTTCAATATGCAAGACCACCTGGTAGAGGTGGCAGAGGTATTGGAATC
TCATCAGACATCGGGAGGGGCAGAGGAGGAAGAGGTCGAGGCAGAGCCCGAGATGAAGAT
CTGGAACTTGCAAAAGCTTTATCTCTGCAAGAAATATCGAACAAAGAACCAAATAGAAGT
GGAAGACCCACAGTGGAACGTCCTCAAACAAAAACAAGAGATCCAGAGCCTCCACGTGAC
TCCCCAGTGGAGTCTCCGAATCCACTGAATCTTGCAGAAGACTTCCCAGGTCTTGGTGCA
TCCGTGTACAAACCCCCTCCTGTTACCAGTGGAACTTATCTCTCAGACATTGCTAGTGAT
CCCCCGGCAGTCACTTCAGTGGCACCTAGCAACACTACAGCCGTGAAACTAGCTGCGGCT
GTCGGCAGATCGACTGGCTCGTTTTCCAAAGAGGAAGATTTCCCTTCTCTAGGATCGAGT
AAAGTCAGGCAGCAATCGAGTGGAGTTTGGGGTGGAACCCCTTTGGCGGGACCCCAAGGA
AGTGGTTCCAGACCCAGAACAAAGAAAAAATCTAATGCCCCTAGCATGCCTGTAAGTGTA
AACGTTCCCCAACCTGTCATGGGTTCCCGGAGCAGAATAGACGTTAAAGATAGTGAACAG
TTCCCATCATTGGGAAAGGGAGCTAATCTCCCTCTTAGTATTTCATCTGGTTGGGTCCAA
ACCCCCACTGTACACCCTAAAAGAACCTACAATGTTTCAAAAGCAAAAAATTTGGTATCT
CAAGAACCAGTCAGAAATACATTCCAGGCCAAACCAACTAAATCAAAAATATCAACAGGA
AATTCCGATAACATAGTTCAGGATGAAATTATTTCTGTCAGACAAGGTTTCGGTAAACAC
GGAATGCAGATCACCATGATCAAACAATCAGAAGAAATCAGCGGCATCGAAAGACCCGTG
GAGTTACCCAGTAGTGGGGCTGGGAGCATGTCCATAAAGACGGTTGATCCCGCTACTTTT
TCGCTGCTGTCTGGACAAAGAATGGATCGTGCTTCACAGAATTCTGGTTTCGATCACTTC
ATGGCGGAAGGAAACGAATTCCCAGAGCTTGGCGGAGGTGCCAGAAATAACAGCCGGGTC
AAAGGTTTTGGAATATCAAAAACAGAAGGGACAACATTACAATCCAATTGGAAACAAGAT
TCTCGACAGCAGAACAAGAAAAAAATTGTAAGCCTGGCGGAAATAAGCAATGATATTTTC
CCTAGCAGTAAAGTAGATACCATAAGTGCTTTAGAAAGACCGAAAAAAAAACATTCCCAA
CAAGAAAGGGTGAAAAAAACAGAAAAGAATATTTCTACTGCTCCTAAAAGTAATTTAACT
GAGAGCAGGCGTTCTAATCCTGATATCCAACTGAAGTCAAATTTTGCCACTGACGATTTT
CCTTCACTGGGAAACCCACAAGGCAATGAGCTATCTAGTTCACCGAACTGGTACGAAGAA
GAAGAACTAAAAGTAGCTGATAAGGTCATCAAGATGAACAATTTCCAAATGGAAGAGAAT
GAATTTCCATCACTTGGTGGTGTCGGCAGTGCTACGAGAAATCAGACGAAGAAAGGAAAA
AAGAAAAAGAAGAATAAAAATGCACAGTCCGCAACAGAAGTTTCCAAGCATTTCAAAGGA
GCTTATGTGGATACTAGTCAGAACGGAGAGCTAACAGGAAATGGACAGCATAATATTTTT
GTTAGTAACGGAGGCTCTGGCAAGAATAAGGACCAACTTGATGATGGTCAGCAATATGCA
GAAGATATGAATGATGATATATATATCTCATTGATGGATCAAAAACCCAGTAAGAAAGAT
ATTGACGGCAGAAATGAATGGTTGTTCAACGCCATCGAACTGCTTTGTGGAACTGACAAG
AAGTACTCGGACTTCAAAACAGCTTCTGCAAAATACAGACGGGGCACAATTTCAGGAAAC
GAATATTATAAGACGTGTCGTACCCTGCTTGGAAAAAGATATTTTTCTGAGGTGTTTACA
GAATTAGTTGATTTGCTGCCCGATCAAGACAAGCAAGAGGAGCTAACACAGATTCACGTC
CCCTGA

InterProScan

ProSiteProfiles
Znf_RING (IPR001841) - T[45-85] 8.565
SMART
Znf_C2H2_type (IPR013087) - T[133-158] 130.0 - T[203-226] 2.8 - T[227-255] 24.0 - T[256-286] 46.0
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[205-226] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN598_HUMAN 49.811 % 296 5.09E-86