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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...'
  2. Transcript 'KH2012:KH.L19.4.v1.A...'
  3. Transcript 'KH2012:KH.C5.23.v1.A...'
  4. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S545.g05658.02.t

Possible name(s)

PRDM16; ZBTB48; ZNF598

Location

S545 [26,433 / 30,690]

Sequences

Amino acid sequence

Length: 875

>Haaura.CG.MTP2014.S545.g05658.02.p
MEANKNTENKPVKYKGQYKKSKGGQQLRQFTPRKRVSECEDDGTCDLCALPIEIYGIGSC
DHPICYRCSAKMRILCEQTHCAVCRVEMKKIIYCKVKMRFEVASQLKSAKPDKSNNWFTD
EEVKKKYKKLFQHTCGSCPDRDPDFTFDLLQVHVRKVHQRFFCDICVKYNKNFTEEYKTY
TRETLARHRRMGDEDDTSHRGHPICEYCDLRYLDSDSLLRHLRLDHYFCHFCDQLGSNQY
YGEYKDLRVHFRKGHFLCEIDECVDEQFTSVFPTELDLKAHRAAVHSRNLNKQQQKADRN
IDLGFQYARPPGRGGRGIGISSDIGRGRGGRGRGRARDEDLELAKALSLQEISNKEPNRS
GRPTVERPQTKTRDPEPPRDSPVESPNPLNLAEDFPGLGASVYKPPPVTSGTYLSDIASD
PPAVTSVAPSNTTAVKLAAAVGRSTGSFSKEEDFPSLGSSKVRQQSSGVWGGTPLAGPQG
SGSRPRTKKKSNAPSMPVSVNVPQPVMGSRSRIDVKDSEQFPSLGKGANLPLSISSGWVQ
TPTVHPKRTYNVSKAKNLVSQEPVRNTFQAKPTKSKISTGNSDNIVQDEIISVRQGFGKH
GMQITMIKQSEEISGIERPVELPSSGAGSMSIKTVDPATFSLLSGQRMDRASQNSGFDHF
MAEGNEFPELGGGARNNSRVKGFGISKTEGTTLQSNWKQDSRQQNKKKIVSLAEISNDIF
PSSKVDTISALERPKKKHSQQERVKKTEKNISTAPKSNLTESRRSNPDIQLKSNFATDDF
PSLGNPQGNELSSSPNWYEEEELKVADKVIKMNNFQMEENEFPSLGGVGSATRNQTKKGK
KKKKNKNAQSATEVSKHFKGAYVDTSQNGELTGNG

Nucleotide sequence

Length: 2,625

>Haaura.CG.MTP2014.S545.g05658.02.t
ATGGAAGCCAACAAGAATACCGAAAACAAACCAGTTAAATATAAAGGCCAGTACAAGAAG
AGCAAAGGAGGTCAACAGCTGAGACAGTTCACGCCGAGGAAACGTGTCAGTGAATGCGAA
GATGACGGAACGTGCGATCTTTGTGCTCTTCCTATCGAAATATATGGGATAGGTTCTTGC
GATCATCCGATATGCTACCGCTGTTCGGCGAAAATGAGGATCCTTTGTGAGCAAACCCAT
TGTGCGGTCTGTCGAGTCGAGATGAAAAAGATCATTTACTGTAAGGTAAAAATGAGATTT
GAAGTTGCAAGCCAATTGAAGTCAGCCAAACCAGATAAATCAAACAACTGGTTTACGGAC
GAAGAAGTAAAGAAAAAGTATAAAAAACTATTCCAACATACATGCGGCTCGTGTCCAGAT
CGCGACCCCGACTTCACTTTTGATTTACTGCAGGTTCACGTTAGAAAAGTGCATCAGCGG
TTTTTCTGTGATATTTGTGTCAAATATAATAAGAATTTCACAGAGGAATACAAAACTTAT
ACTCGTGAAACTCTGGCTAGACACAGGAGAATGGGAGATGAAGATGACACCTCTCATCGT
GGGCATCCGATATGCGAATATTGCGATCTTCGTTACTTAGACAGTGATTCCCTTCTTCGT
CACTTGAGATTAGATCATTACTTTTGTCATTTCTGTGATCAACTTGGATCTAATCAATAT
TATGGGGAGTATAAGGACTTGAGGGTGCATTTTCGCAAGGGCCATTTCCTCTGTGAAATT
GATGAATGTGTGGATGAACAGTTCACATCTGTATTTCCGACAGAGCTCGACCTAAAGGCT
CATAGAGCTGCTGTTCACAGCAGAAATCTTAACAAACAGCAACAGAAGGCAGACAGGAAC
ATTGATCTTGGTTTTCAATATGCAAGACCACCTGGTAGAGGTGGCAGAGGTATTGGAATC
TCATCAGACATCGGGAGGGGCAGAGGAGGAAGAGGTCGAGGCAGAGCCCGAGATGAAGAT
CTGGAACTTGCAAAAGCTTTATCTCTGCAAGAAATATCGAACAAAGAACCAAATAGAAGT
GGAAGACCCACAGTGGAACGTCCTCAAACAAAAACAAGAGATCCAGAGCCTCCACGTGAC
TCCCCAGTGGAGTCTCCGAATCCACTGAATCTTGCAGAAGACTTCCCAGGTCTTGGTGCA
TCCGTGTACAAACCCCCTCCTGTTACCAGTGGAACTTATCTCTCAGACATTGCTAGTGAT
CCCCCGGCAGTCACTTCAGTGGCACCTAGCAACACTACAGCCGTGAAACTAGCTGCGGCT
GTCGGCAGATCGACTGGCTCGTTTTCCAAAGAGGAAGATTTCCCTTCTCTAGGATCGAGT
AAAGTCAGGCAGCAATCGAGTGGAGTTTGGGGTGGAACCCCTTTGGCGGGACCCCAAGGA
AGTGGTTCCAGACCCAGAACAAAGAAAAAATCTAATGCCCCTAGCATGCCTGTAAGTGTA
AACGTTCCCCAACCTGTCATGGGTTCCCGGAGCAGAATAGACGTTAAAGATAGTGAACAG
TTCCCATCATTGGGAAAGGGAGCTAATCTCCCTCTTAGTATTTCATCTGGTTGGGTCCAA
ACCCCCACTGTACACCCTAAAAGAACCTACAATGTTTCAAAAGCAAAAAATTTGGTATCT
CAAGAACCAGTCAGAAATACATTCCAGGCCAAACCAACTAAATCAAAAATATCAACAGGA
AATTCCGATAACATAGTTCAGGATGAAATTATTTCTGTCAGACAAGGTTTCGGTAAACAC
GGAATGCAGATCACCATGATCAAACAATCAGAAGAAATCAGCGGCATCGAAAGACCCGTG
GAGTTACCCAGTAGTGGGGCTGGGAGCATGTCCATAAAGACGGTTGATCCCGCTACTTTT
TCGCTGCTGTCTGGACAAAGAATGGATCGTGCTTCACAGAATTCTGGTTTCGATCACTTC
ATGGCGGAAGGAAACGAATTCCCAGAGCTTGGCGGAGGTGCCAGAAATAACAGCCGGGTC
AAAGGTTTTGGAATATCAAAAACAGAAGGGACAACATTACAATCCAATTGGAAACAAGAT
TCTCGACAGCAGAACAAGAAAAAAATTGTAAGCCTGGCGGAAATAAGCAATGATATTTTC
CCTAGCAGTAAAGTAGATACCATAAGTGCTTTAGAAAGACCGAAAAAAAAACATTCCCAA
CAAGAAAGGGTGAAAAAAACAGAAAAGAATATTTCTACTGCTCCTAAAAGTAATTTAACT
GAGAGCAGGCGTTCTAATCCTGATATCCAACTGAAGTCAAATTTTGCCACTGACGATTTT
CCTTCACTGGGAAACCCACAAGGCAATGAGCTATCTAGTTCACCGAACTGGTACGAAGAA
GAAGAACTAAAAGTAGCTGATAAGGTCATCAAGATGAACAATTTCCAAATGGAAGAGAAT
GAATTTCCATCACTTGGTGGTGTCGGCAGTGCTACGAGAAATCAGACGAAGAAAGGAAAA
AAGAAAAAGAAGAATAAAAATGCACAGTCCGCAACAGAAGTTTCCAAGCATTTCAAAGGA
GCTTATGTGGATACTAGTCAGAACGGAGAGCTAACAGGAAATGGA

InterProScan

ProSiteProfiles
Znf_RING (IPR001841) - T[45-85] 8.565
SMART
Znf_C2H2_type (IPR013087) - T[133-158] 130.0 - T[203-226] 2.8 - T[227-255] 24.0 - T[256-286] 46.0
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[205-226] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN598_HUMAN 49.811 % 297 3.05E-87