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TRANSCRIPT CARD

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  1. Clone 'cima002c03' > 
  2. Clone 'cien95308' > 
  3. Clone 'cima823791' > 
  4. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S55.g01332.02.t

Possible name(s)

LPP; TRIP6; ZYX

Gene model

Haaura.CG.MTP2014.S55.g01332

Location

S55 [36,063 / 37,288]

Sequences

Amino acid sequence

Length: 249

>Haaura.CG.MTP2014.S55.g01332.02.p
MQNQSISKSTPLAVSTSTKSVKKQRSPEEELEFYTQSLIDNMNSPPDKEMYGYCGKCNDV
VEGEKTGCSAMEKIFHINCFSCTTCGRVLHGNEFYVVDQEPFCEKCYMDSLEKCTVCSDV
IKVRILRATGKPYHPECFRCVVCTKCLDGIPFTVDVTNQIYCVDDFQKKFAPRCSVCHQS
ILPESGQEETVRIIALDRNFHVDCYKCEKCGVKLTSEKDGKKCFPLDGHVLCGDCNSAMV
QELSQAIQ*

Nucleotide sequence

Length: 747

>Haaura.CG.MTP2014.S55.g01332.02.t
ATGCAGAACCAATCAATATCCAAATCAACTCCATTGGCGGTCTCTACGTCGACCAAAAGT
GTTAAAAAACAACGAAGTCCGGAAGAAGAATTGGAGTTTTATACACAGTCGTTGATCGAC
AACATGAATAGTCCACCGGATAAGGAAATGTATGGTTATTGCGGTAAATGCAATGATGTT
GTTGAAGGGGAAAAAACTGGATGTTCAGCAATGGAGAAGATATTTCATATTAACTGCTTT
AGCTGTACAACCTGTGGTCGTGTGCTTCATGGCAATGAGTTTTATGTCGTTGATCAGGAA
CCGTTTTGTGAAAAATGCTACATGGATTCTTTAGAGAAATGTACAGTGTGTTCTGATGTT
ATCAAAGTTCGAATTTTAAGAGCTACTGGAAAGCCTTATCATCCAGAGTGTTTCAGATGC
GTTGTCTGCACTAAATGCCTGGATGGAATCCCATTCACAGTCGATGTGACTAATCAAATA
TATTGCGTTGATGATTTCCAAAAGAAATTTGCACCCCGATGTTCCGTCTGTCATCAATCC
ATATTGCCAGAGTCGGGCCAAGAGGAAACCGTTCGTATCATTGCTCTTGACAGAAACTTC
CATGTGGATTGCTACAAATGCGAAAAGTGTGGGGTGAAGCTGACTTCGGAAAAAGATGGA
AAAAAATGCTTTCCGCTTGACGGGCATGTCCTGTGTGGGGATTGCAATAGCGCTATGGTG
CAAGAATTAAGTCAAGCGATCCAGTGA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[52-111] 10.405 - T[112-172] 12.969 - T[173-242] 10.039
SMART
Znf_LIM (IPR001781) - T[53-106] 2.3E-12 - T[113-165] 1.6E-13 - T[173-235] 7.4E-14
Pfam
Znf_LIM (IPR001781) - T[54-109] 9.5E-13 - T[114-170] 1.9E-10 - T[174-236] 3.0E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 54.185 % 281 5.38E-93
LPP_HUMAN 55.111 % 279 7.54E-91
ZYX_HUMAN 49.302 % 227 4.52E-71