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TRANSCRIPT CARD

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  1. Clone 'ma160i03' > 
  2. Transcript 'KH2012:KH.C5.148.v1....' > 
  3. Clone 'cima822469' > 
  4. Transcript 'KH2012:KH.C1.26.v6.A...' > 
  5. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S56.g01372.01.t

Possible name(s)

BMP2; BMP4; NODAL

Gene model

Haaura.CG.MTP2014.S56.g01372

Location

S56 [111,072 / 113,278]

Sequences

Amino acid sequence

Length: 426

>Haaura.CG.MTP2014.S56.g01372.01.p
MNCKFVVMTVIFVVFNFTSSESRLSGLRALSSSQNKDLPPRMVEFHQQILKRLEIHTSTE
SSTNLASSYMMELYQKKSDISAAQSPIFARSFSQRRDSRKQNGRERTALKRSDIIRSFSA
TEFKVIGETLVVSYDMSAVKSGERIRFSEMRMKTSESLKDVNTIVIRQQIKTSQKVSGFR
NLGSVQINPERISSPKKITLDTTNIIRRWYRANAQNSASFSDDIDSNERAEEELDSMADE
DFTLVIFSNNEDYNLMDTTNERLNRFRRESGHRHHHERQRRRRQKNKRRNKNEDNKNEIE
EVLKASEQPIPENVYPQSKTPVHCRKVAFEVDFDKIGWGEWIIYPRRYNAFRCEGTCNIA
MMQQKTSTNHAYVQSMFSTSRPDLDIPLPCCVPTQLKSLSLLYFENGEVVQRDHEEMVVE
ECGCR*

Nucleotide sequence

Length: 1,278

>Haaura.CG.MTP2014.S56.g01372.01.t
ATGAATTGCAAATTCGTTGTGATGACTGTGATATTCGTCGTTTTCAACTTCACCTCGTCG
GAAAGTCGCCTTTCTGGACTGAGAGCACTTTCAAGTTCCCAAAATAAAGATTTACCTCCG
AGAATGGTCGAGTTTCATCAGCAAATATTGAAGCGTTTGGAAATTCATACATCCACCGAA
AGCAGCACCAATCTTGCAAGCAGTTATATGATGGAATTATACCAGAAAAAGAGCGATATT
TCTGCGGCCCAGTCGCCGATCTTCGCTCGCTCGTTCAGTCAGCGCCGGGATTCGCGAAAA
CAAAATGGCAGAGAAAGGACGGCGTTGAAAAGATCGGATATCATTCGAAGTTTTTCTGCC
ACTGAATTCAAAGTCATTGGAGAAACCCTTGTCGTTTCCTATGATATGTCGGCAGTCAAG
TCTGGAGAAAGAATTCGATTTTCTGAAATGCGCATGAAAACGTCTGAATCATTGAAAGAT
GTCAACACGATTGTAATTCGACAACAGATCAAGACATCGCAGAAGGTTTCCGGTTTCAGA
AACCTCGGATCTGTTCAGATCAATCCTGAAAGAATTTCAAGTCCTAAAAAAATCACTCTG
GATACAACCAACATCATTCGTCGTTGGTACAGAGCAAATGCACAGAATTCGGCCTCATTT
TCTGACGACATAGACAGCAATGAACGCGCTGAAGAGGAACTAGATTCAATGGCTGACGAA
GATTTTACACTAGTCATCTTCTCCAATAATGAAGATTACAATCTTATGGACACCACAAAC
GAACGATTGAATCGTTTCAGACGCGAGTCCGGACACCGTCATCATCACGAGAGACAGAGA
CGTCGTCGCCAAAAGAACAAAAGACGCAACAAGAATGAGGACAACAAAAATGAAATCGAA
GAAGTATTGAAAGCATCCGAGCAACCTATTCCAGAAAATGTGTACCCTCAGTCGAAAACT
CCTGTCCATTGTCGCAAGGTTGCATTTGAAGTCGATTTTGATAAAATCGGATGGGGTGAA
TGGATCATCTACCCGCGTCGCTATAACGCTTTTCGTTGCGAAGGAACCTGCAACATCGCG
ATGATGCAGCAGAAGACATCCACTAATCATGCATACGTACAAAGCATGTTTTCAACGTCT
CGACCGGATTTGGATATTCCTTTGCCATGCTGTGTCCCAACCCAACTCAAGTCGCTCAGT
CTGTTATATTTTGAAAACGGCGAAGTGGTTCAACGCGACCACGAGGAGATGGTGGTAGAA
GAATGCGGATGCAGATAA

InterProScan

PANTHER
TGF-beta-rel (IPR015615) - T[51-425] 7.3E-81
ProSiteProfiles
TGF-b_C (IPR001839) - T[280-425] 32.356
Gene3D
Cystine-knot_cytokine (IPR029034) - T[314-425] 1.8E-32
SUPERFAMILY
Cystine-knot_cytokine (IPR029034) - T[321-425] 2.07E-32
Pfam
TGF-b_C (IPR001839) - T[323-424] 2.5E-29
SMART
TGF-b_C (IPR001839) - T[324-425] 1.3E-48
ProSitePatterns
TGFb_CS (IPR017948) - T[342-357] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NODAL_HUMAN 28.406 % 140 5.19E-38
BMP2_HUMAN 25.495 % 108 3.28E-26
BMP4_HUMAN 44.66 % 106 3.0E-25