- Clone 'AHC0AAA81YD23' >
- Clone 'cien177900' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S576.g05795.01.t
Possible name(s)
RBM41; RNPC3; SNRPA
Gene model
Location
S576 [30,340 / 32,875]
Amino acid sequence
Length: 524
>Haaura.CG.MTP2014.S576.g05795.01.p
SLVYSKILYEILHEIMETRHSNVLYVKHLPCSLTSTEKKEFLKYFGAVEVRVMPDKGKFK
HSAFATFKDTEKAKQAISRLHQIEILNSVISVEFAHSSLKKLKELVEDESENGEESLSKS
RRDANKKAEVERFGKKSQVEILPPIAPHFGLHYPANPGLKYKYPPPNSDILINICSALIT
VPKLYTQVLHLMNKMNLVPPFSSATTIPRMILNHIHPLRVGMSTRALHKRKMKLPRNDTL
NNSEMSESESEIETDQSEGDYCDRIQKSANSLVPERVLNARKRKKNQAPGEITKKRRLQQ
FITPTVTNDQTMEKEVPNMADVFGENIAIDIGKKIEVKVPSTFVAHDNISSQTEPEDSSY
KNREEQPTNEIDAAFGKFSPVRSNDNRGENENEESEGELLLTDFITRKQLESGQLSRKEI
SNSSTFKKYNKGDPTCRLYIKNLSKKVTEKDLKFVYGFFVNFKNETEKNMFDVRVMTQGR
MKGQAFVGLPSVEIASKALKATNGYQLMNKPMIVQFARSAKPK*
Nucleotide sequence
Length: 1,572
>Haaura.CG.MTP2014.S576.g05795.01.t
AGTTTAGTTTATAGTAAGATTTTGTACGAAATTCTACACGAAATAATGGAAACAAGGCAC
AGTAACGTTTTGTACGTGAAGCATCTTCCATGTTCACTTACCAGCACCGAGAAAAAAGAA
TTTCTCAAATATTTTGGAGCTGTAGAAGTTCGCGTAATGCCTGACAAAGGAAAATTCAAA
CATTCAGCTTTTGCCACTTTCAAAGATACTGAGAAAGCTAAACAGGCAATTTCACGTCTT
CATCAAATTGAAATATTGAATTCTGTGATAAGCGTGGAATTCGCACACTCCTCTTTGAAG
AAACTCAAGGAGTTGGTAGAAGATGAGTCAGAGAATGGAGAAGAATCATTGAGTAAATCA
CGGAGAGATGCAAATAAAAAAGCAGAGGTGGAAAGGTTTGGTAAAAAGTCTCAAGTAGAA
ATTCTTCCACCTATTGCTCCACATTTTGGTTTGCATTATCCAGCCAATCCTGGTTTAAAA
TATAAATATCCGCCACCTAACTCGGATATCCTCATTAACATATGCTCTGCCTTGATCACC
GTCCCAAAACTGTACACTCAGGTTCTTCATCTAATGAATAAAATGAATTTGGTTCCACCT
TTTTCTTCTGCGACAACTATACCTCGGATGATTTTAAACCACATTCACCCCTTACGTGTT
GGAATGTCAACACGTGCGTTACACAAAAGAAAAATGAAACTGCCCCGGAACGACACTTTG
AACAATTCAGAAATGTCAGAGTCCGAGTCGGAAATTGAAACAGATCAATCTGAAGGCGAT
TATTGTGATAGAATACAAAAAAGTGCAAATTCTCTTGTGCCAGAAAGAGTATTGAATGCA
AGAAAGCGCAAAAAAAACCAAGCACCCGGCGAGATCACAAAGAAACGTAGATTACAACAA
TTTATTACTCCTACTGTGACTAATGATCAAACCATGGAAAAAGAGGTCCCAAACATGGCT
GATGTTTTTGGTGAAAATATTGCAATTGACATTGGGAAGAAGATTGAAGTTAAGGTTCCT
TCTACTTTCGTAGCGCATGATAACATAAGCTCCCAGACTGAACCTGAAGATTCAAGTTAT
AAAAACAGAGAAGAACAACCAACAAATGAGATTGATGCAGCGTTTGGAAAATTTTCTCCC
GTGAGATCTAATGATAACCGTGGTGAAAATGAGAATGAGGAAAGTGAAGGTGAGCTATTG
CTTACCGACTTCATTACACGGAAACAATTAGAATCCGGTCAGTTATCTAGAAAAGAAATA
TCTAATTCCTCAACCTTCAAAAAGTACAATAAAGGAGACCCAACCTGTCGCTTGTACATT
AAGAACCTTTCGAAGAAGGTCACAGAGAAAGATCTTAAATTCGTTTACGGCTTCTTTGTC
AACTTCAAAAACGAGACAGAAAAAAATATGTTCGATGTTCGAGTTATGACACAAGGGAGG
ATGAAGGGACAAGCGTTTGTTGGTCTACCAAGCGTGGAAATTGCTTCCAAAGCACTGAAG
GCAACAAATGGATATCAGTTAATGAACAAACCAATGATTGTCCAGTTTGCAAGATCTGCT
AAACCAAAATGA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[13-114] 3.4E-14 - T[432-523] 2.1E-22 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[17-98] 6.04E-15 - T[418-521] 2.96E-16 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[22-97] 11.503 - T[436-519] 13.243 |
| SMART |
RRM_dom (IPR000504) - T[23-93] 4.0E-8 - T[437-515] 5.7E-10 |
| CDD |
RBM40_RRM1 (IPR034147) - T[24-95] 3.29602E-28 |
| Pfam |
RRM_dom (IPR000504) - T[24-90] 2.3E-9 - T[438-511] 4.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM40_HUMAN | 37.795 % | 301 | 3.09E-96 |
| RBM41_HUMAN | 38.017 % | 87.8 | 1.34E-18 |