- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.L4.23.v1.A...' >
- Transcript 'Haaura.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S578.g05798.01.t
Possible name(s)
GLI1; GLI2; GLI3
Gene model
Location
S578 [3,779 / 17,522]
Amino acid sequence
Length: 1,640
>Haaura.CG.MTP2014.S578.g05798.01.p
AEEDDERLRMQKHAGRGRRGAIGPPDYRPPSCGTPLGKITEEEQTRSPQIKRQPSEEREL
AKQNVSNSRRNNVDVGHSLSHHETNNKHSFIAPAVPGDKTRNNEQGGSDHHLPLSYVQPH
IPLDSQIREGRYPFDPRQLNIHSDPGISGSPVLSDIPFIPMSPHSPMHPPLNGAPGLFMN
SGLGNQITSSSFDLYMRSLTGSPTMSVLSQARGLSPRHSYQGREGEKLPYQYFTPQQANA
LAAATFAGMTDAQNGVSSAMPGVNLVQGIQSQPAINAMKYYQLTPQQRLFAAAANGSMDR
SLAMSFDRTGDMSRLSSPFYMRSRQGRKRALSISPSQSDISLDLNLMIRTSPNSLVPFGG
SLGNSRTSSIGSAGSYGHLGARGISPSIGFHPRLASPLHPQFFSQQMAVAAANFSGLSAA
PSVTSHMGPNIRSLPPHSTMDSRNGHLSYSMGINAAKSTSQGRNKGPSNSQSHFDNNEGR
KTIQQQLSYNQSTIKAEPMSPAIFSQNKSHQGTGGGQLNNADETETVYETNCGWENCSRE
FDTQEQLVHHINNDHIHGEKKEFVCRWKDCARDQKPFKAQYMLVVHMRRHTGEKPHRCTF
EGCTKAYSRLENLKTHLRSHTGEKPYVCDHPGCTKAFSNASDRAKHQNRTHSNEKPYICR
IPNCTKRYTDPSSLRKHVKTVHGPEAHVTKRMKAERRREELKKNDSNEPSIKQESNDDEQ
NGNKDDNHNSNSDRHNCRPRSPGSTQSNDTNAPSNMNPRSNQSTCTSGSDMSTTPQHSPH
ANSHHHNNDSGVELNNGHGRDADSDGDIVVDENPLPDSTSGGTVGLQSRRRSSLRSTLIH
PMVNKKMQSLSLEGTGPGCLPPLGPDMFSGSILPSLPGTKSEQPNSPYLYNPRNIHLPGN
GTDEVSSTTISSPKQFLHPNASSPHNKSGISMKSNQHSSLGALHRQAALIGQERRDSGTS
SGQPSRKPSSVSNASRRSSQASTQNANVAGSYDPISIGSSRRSSGASMVHGNNNRSSSNL
TTLSPYTLHRLTSKYNEATGKPPPTPIDRDNYTKSQLGKWLQEDAMARSHGPSSRSSSYA
NCATASHRQMGPPAPVPPHPPSGPNNANRRRSDYIRSLRTPQPHEIPSNGVRRASEPIAK
TSEQQIDPSKLPDVQRYYSLNNVNPLPNIRGHNNYHGQSMNGHMQVPGNYPYNNGFLSTG
SLQNARQRSDSNGSFYSSESGYQSNGSNIALNNPVEYQNVQFHNQQHLQSQRMFGNNQQR
FMQNGNIPNSGVNENILQENLNADMVSGMDGMFPNDHAYESAMMQNFMVTPSRQHQQSYS
EQPASNMYHPNFQQPNSIPMRSNSNGFINTASFVDNSGMQRQHSNGNYHQPIINHNNPPY
SMANRQMPGMDQANLVQYPDQNQVYNSRQHSGGYQAQNSQAFCSNNYNGFNNGPIYTQGE
IIPRPPASTTNNNAANMNRYRMSRLRNAKQPTHPPPSELQQPPSRINCTPDAEIPASYLQ
EEFIDSIPALHVSGSFDDGLKNRNYTKMPADSTTGPDEGRAEYIGDGGDDNFDAMSGTNT
DVTLPLMSGFSTRLATPQIEKPYTGSLQQQVTNEQMAAGLGDSLHMNPASNMALNSMSSM
LSTLAEENKYLQMMPNNGL*
Nucleotide sequence
Length: 4,920
>Haaura.CG.MTP2014.S578.g05798.01.t
GCAGAAGAGGATGACGAGCGGCTTCGGATGCAAAAACATGCAGGCCGAGGCCGACGTGGT
GCGATCGGTCCACCCGATTATCGACCTCCGAGCTGCGGAACGCCACTAGGAAAAATTACT
GAGGAAGAACAAACCAGATCACCACAGATCAAAAGGCAACCAAGTGAAGAAAGAGAACTA
GCAAAACAGAACGTATCCAATTCGCGCCGCAACAACGTGGATGTGGGACATTCATTATCT
CATCACGAAACCAACAACAAGCACTCCTTTATCGCGCCTGCTGTACCGGGTGATAAAACT
CGAAATAATGAACAAGGAGGATCAGATCATCATCTGCCGTTAAGTTATGTGCAACCTCAC
ATCCCCTTGGATTCTCAGATCAGAGAAGGAAGATATCCTTTTGATCCCAGGCAGCTGAAC
ATACATAGTGATCCTGGTATAAGTGGCAGTCCTGTGTTGTCAGATATACCTTTCATTCCT
ATGTCTCCCCACTCACCAATGCATCCACCATTAAATGGAGCACCTGGTCTGTTCATGAAC
TCGGGACTTGGGAATCAAATAACGTCATCGTCATTCGACCTCTATATGCGTTCACTCACT
GGCTCACCTACCATGTCTGTGCTTTCTCAAGCAAGGGGCTTGAGTCCTAGACATTCATAC
CAAGGTCGAGAAGGCGAGAAACTCCCATATCAGTATTTCACTCCTCAACAAGCCAATGCA
TTAGCAGCTGCTACATTTGCTGGTATGACAGACGCTCAGAATGGAGTTTCATCTGCTATG
CCTGGTGTGAATCTTGTTCAAGGGATTCAGTCACAACCAGCTATCAACGCAATGAAATAC
TATCAACTCACACCCCAGCAGAGGCTGTTTGCAGCTGCGGCAAATGGAAGTATGGATCGC
TCCCTCGCCATGTCTTTTGACCGTACTGGTGACATGTCTCGCTTGTCCAGTCCATTTTAT
ATGAGGTCCCGTCAAGGTCGCAAAAGGGCACTTTCCATTTCTCCTTCACAGTCTGACATC
AGCCTAGACCTCAATCTGATGATCCGCACCTCTCCCAACTCTCTTGTGCCCTTCGGAGGT
AGTTTAGGTAATTCAAGGACTTCTTCAATAGGCAGTGCAGGCAGCTATGGTCACTTGGGT
GCTCGAGGCATTAGCCCATCCATTGGCTTTCATCCTCGTCTGGCTTCGCCGCTCCACCCG
CAGTTTTTCAGCCAGCAAATGGCTGTAGCTGCTGCAAATTTCAGTGGCCTCTCTGCTGCA
CCCAGTGTGACTTCACACATGGGACCTAATATTAGATCCCTACCTCCTCATTCTACAATG
GACTCAAGAAATGGTCATTTATCCTATTCAATGGGGATCAATGCGGCTAAATCCACTAGC
CAAGGCAGAAATAAAGGCCCATCAAACAGCCAGTCACATTTTGATAACAATGAAGGAAGA
AAGACTATACAACAGCAGCTGTCATACAATCAAAGTACAATCAAAGCAGAACCCATGAGT
CCTGCAATATTTTCACAAAATAAATCTCATCAAGGTACTGGAGGAGGACAACTAAATAAT
GCTGATGAAACGGAAACCGTTTACGAGACAAACTGTGGATGGGAAAACTGCTCTAGAGAG
TTTGATACGCAAGAGCAACTAGTGCATCACATTAATAATGATCACATTCACGGCGAGAAA
AAGGAGTTTGTCTGCAGGTGGAAGGACTGTGCACGTGATCAAAAACCTTTCAAAGCTCAG
TACATGCTTGTGGTGCATATGAGACGACATACTGGAGAAAAGCCTCACAGATGCACGTTT
GAAGGCTGTACGAAAGCATATTCCAGGCTTGAAAATCTGAAAACTCACTTGCGATCGCAC
ACTGGTGAGAAACCCTATGTTTGTGATCATCCAGGATGCACCAAGGCTTTCAGCAATGCT
TCTGATCGTGCAAAACACCAAAATAGGACACATTCTAACGAGAAACCCTACATATGTAGA
ATTCCTAATTGCACCAAGAGGTACACTGATCCTAGCTCTTTGAGAAAGCATGTTAAAACT
GTTCATGGTCCTGAGGCTCACGTGACAAAGCGAATGAAGGCCGAGCGGAGGCGAGAAGAA
CTAAAAAAAAATGATTCAAATGAGCCATCAATCAAACAGGAATCCAACGATGATGAACAA
AATGGCAACAAAGATGATAATCACAACTCAAATTCAGACAGACATAATTGCAGGCCTAGG
TCCCCAGGCAGCACCCAATCAAATGACACTAATGCTCCAAGCAACATGAATCCCCGTAGC
AACCAATCAACTTGCACGTCTGGTTCTGACATGTCGACAACTCCGCAACACTCTCCCCAT
GCCAATTCTCATCACCACAACAATGATTCTGGTGTTGAATTGAACAATGGCCACGGAAGA
GATGCAGACAGCGACGGTGACATTGTTGTTGATGAGAACCCTTTACCAGATTCAACTTCT
GGAGGCACTGTAGGATTGCAGTCGAGAAGACGTTCATCGTTGCGTTCCACCTTGATCCAC
CCGATGGTGAACAAGAAGATGCAGAGTTTGTCATTGGAAGGAACGGGTCCAGGGTGTTTG
CCTCCTCTTGGGCCAGATATGTTCAGTGGAAGTATTCTACCCTCATTACCAGGAACTAAA
TCGGAGCAACCTAATTCTCCTTATTTGTACAATCCACGAAATATTCATTTACCTGGGAAT
GGAACCGATGAAGTCTCATCAACGACTATATCCAGTCCCAAGCAATTTCTTCATCCCAAT
GCATCATCTCCTCATAACAAATCAGGCATAAGCATGAAATCCAATCAGCACTCCAGTTTG
GGCGCATTGCATCGACAGGCAGCTCTGATTGGCCAGGAAAGAAGGGATAGCGGAACAAGT
TCTGGTCAACCGAGTCGAAAACCTTCATCAGTATCCAATGCAAGTCGAAGGTCAAGTCAG
GCTTCAACTCAAAATGCTAATGTAGCTGGTTCATATGATCCCATTTCTATCGGCTCTTCT
CGACGCTCGAGCGGTGCTTCTATGGTTCATGGAAACAATAATAGGTCTTCATCAAACCTC
ACAACATTGAGTCCATATACCTTACATCGGCTTACTTCGAAATACAATGAAGCGACAGGA
AAGCCTCCACCTACACCAATTGACAGGGACAATTATACAAAAAGTCAGCTTGGAAAATGG
CTTCAAGAAGACGCTATGGCTCGATCACACGGGCCTAGTTCAAGATCATCATCATATGCG
AATTGTGCCACTGCCTCGCATCGTCAAATGGGACCTCCAGCACCTGTACCACCACATCCT
CCCAGTGGTCCGAACAATGCTAACAGGAGGCGTAGTGACTATATACGTTCACTAAGAACC
CCACAGCCACATGAAATTCCCAGTAATGGCGTGAGAAGAGCAAGCGAACCTATTGCCAAA
ACTTCTGAGCAACAAATTGATCCTTCAAAATTACCTGATGTTCAACGCTATTACAGCTTG
AATAATGTCAATCCTTTGCCAAATATCAGAGGCCATAACAATTATCATGGCCAGTCCATG
AATGGCCATATGCAAGTTCCAGGCAACTATCCATATAATAATGGGTTTCTTTCTACTGGC
AGTTTACAGAATGCCCGACAACGATCTGACAGCAATGGCAGTTTCTATAGCAGTGAGAGC
GGGTATCAAAGCAATGGAAGTAACATTGCTCTGAACAACCCAGTAGAATACCAGAATGTA
CAATTCCACAATCAGCAGCATCTTCAGAGTCAACGAATGTTTGGTAATAATCAACAGCGA
TTCATGCAAAACGGAAACATCCCTAATAGTGGTGTGAATGAGAATATACTGCAAGAAAAC
CTAAATGCCGACATGGTTTCTGGAATGGATGGAATGTTTCCAAACGATCATGCTTATGAG
AGTGCAATGATGCAAAATTTTATGGTGACACCTTCGAGACAGCATCAGCAATCTTATTCG
GAGCAACCAGCTAGCAATATGTATCACCCCAACTTTCAACAGCCGAATTCAATCCCGATG
CGTTCAAACTCGAATGGCTTCATTAACACTGCCAGTTTTGTCGACAACTCGGGAATGCAG
CGACAGCACAGTAATGGAAATTACCATCAACCAATCATCAACCACAACAATCCTCCTTAT
AGCATGGCAAATCGCCAAATGCCAGGCATGGACCAAGCCAATCTCGTGCAATATCCTGAC
CAGAATCAAGTTTATAACTCTAGGCAGCACAGCGGAGGTTATCAGGCACAAAATTCTCAA
GCTTTCTGCTCGAACAATTATAACGGATTCAACAATGGTCCTATATATACTCAAGGAGAA
ATCATACCCAGGCCTCCTGCAAGCACCACCAATAACAATGCAGCAAACATGAACCGATAC
AGAATGTCGAGACTGAGGAACGCCAAGCAGCCGACCCATCCTCCGCCTTCAGAGCTGCAA
CAACCACCTAGTCGTATTAACTGCACTCCTGATGCTGAGATACCAGCCTCCTATCTTCAA
GAAGAGTTCATTGACAGTATTCCTGCTTTGCATGTATCTGGCAGTTTTGATGATGGGTTA
AAGAATAGGAACTATACAAAGATGCCTGCTGACAGCACAACAGGCCCAGATGAGGGAAGA
GCAGAATATATCGGTGATGGTGGTGACGATAATTTTGATGCAATGAGTGGAACAAATACA
GATGTTACTCTTCCTCTTATGTCTGGATTTTCTACACGTTTGGCTACTCCACAAATTGAG
AAGCCATACACAGGAAGTTTACAACAGCAAGTAACGAATGAGCAAATGGCTGCAGGTTTG
GGTGATTCTTTACATATGAACCCCGCATCCAACATGGCTCTAAACAGTATGAGCTCAATG
CTCAGCACACTAGCGGAAGAGAACAAGTACCTCCAGATGATGCCCAATAATGGACTTTGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[530-559] 2.27E-7 - T[577-633] 1.84E-17 - T[622-684] 5.24E-9 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[530-562] 9.141 - T[568-595] 10.325 - T[596-625] 14.336 - T[626-656] 13.464 - T[657-687] 10.533 |
| SMART |
Znf_C2H2_type (IPR013087) - T[530-555] 1.4 - T[563-590] 2.3 - T[596-620] 0.0043 - T[626-651] 0.014 - T[657-682] 0.0015 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[532-555] . - T[598-620] . - T[628-651] . - T[659-682] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLI1_HUMAN | 52.199 % | 338 | 1.27E-96 |
| GLI2_HUMAN | 38.352 % | 448 | 1.36E-131 |
| GLI3_HUMAN | 38.546 % | 490 | 2.63E-146 |