Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 619

>Haaura.CG.MTP2014.S57.g01398.01.p
MSISNEIHDRRKRQTDSDLSYLIKYGYVSNGALKSNGEVQEQRSLRRAVLELQRFTGLPQ
TGQFDEETRAMMRKPRCANPDRDSVMGDLVRKKRFTTVGSKWKNLRISYSINNFTPKIGK
TATHNAIEDAFRVWASYAPLEFLKVTKDDNPDIVILFATGNHDDNTPFDGEGGYLAHAFY
PGPGIGGDTHFDAEEPWTVNKGPYEGNDLFLVAVHELGHALGLGHSPDTKAIMAPVYKYH
DTTNFQLPQDDIDGIQMLYGVAHRRPDIPIRPTSTTTKAPTTTTTSATRKTSKSTTTRTR
KPYRPYTRAPTEQTLSTQLPTTPPPPDVCNLPKYDAVAFLRNELYVFSSKYLWRKGPKDK
SPRGPFPIVSFWSRLSSGVDAAFEKPATGIIVLIKGSYYYEFNGMELERGFPKHVRSMGI
NGADFDAAIWWERNGRIYFFKDDKYWRIHKYAAEKDYPKDIGVWTGIPSSLDAAFTGVGD
DGLNHTYFVKGTQYWTFHNRKVEAVGEPGNFAADWLGCPAITSSLPRPPNTGVSVPAVAA
VSVVIVMLLLGLTFYIVYQKKQGFKYPPTEAGVVASPYRAGYKTHHTMEDSDVHGRRLWV
KTFHHGWNNLKFSFQQRV*

Nucleotide sequence

Length: 1,857

>Haaura.CG.MTP2014.S57.g01398.01.t
ATGTCAATTTCAAATGAAATACACGATCGACGAAAGCGACAAACGGATTCAGACCTGAGT
TACTTGATAAAATATGGATACGTATCCAATGGAGCTTTGAAATCGAACGGCGAAGTTCAA
GAGCAACGGAGTTTGAGGAGAGCTGTTCTAGAGCTGCAAAGGTTTACGGGTTTACCTCAA
ACCGGACAATTTGACGAGGAGACAAGGGCCATGATGCGGAAACCCAGGTGCGCGAACCCT
GATCGCGACTCTGTCATGGGAGATTTAGTGCGTAAAAAAAGATTTACAACGGTCGGGTCA
AAGTGGAAAAATCTTCGTATTTCGTACTCGATCAACAATTTCACTCCCAAAATCGGAAAG
ACGGCAACGCACAATGCAATCGAAGACGCTTTTAGAGTTTGGGCGAGTTACGCTCCTTTG
GAATTTCTCAAAGTTACCAAAGATGACAACCCCGACATCGTCATCCTTTTCGCGACGGGA
AACCACGACGACAATACTCCTTTCGATGGAGAGGGTGGGTATCTTGCCCACGCATTCTAT
CCGGGACCGGGAATTGGGGGAGACACCCATTTTGACGCCGAGGAACCGTGGACAGTGAAC
AAAGGTCCTTATGAAGGAAACGATTTGTTTCTGGTTGCTGTGCACGAACTGGGTCATGCC
CTCGGTCTTGGTCATTCGCCCGATACCAAGGCAATAATGGCACCTGTATACAAATACCAT
GACACCACTAATTTCCAACTTCCGCAAGATGACATTGATGGCATTCAAATGCTATACGGC
GTAGCACATCGTCGTCCTGATATTCCCATTCGTCCAACAAGTACAACTACAAAGGCTCCA
ACCACAACGACGACATCAGCGACAAGAAAAACTAGCAAGTCGACAACGACCCGAACAAGA
AAACCATATCGGCCATACACAAGAGCACCAACGGAGCAAACTCTGAGTACGCAATTACCT
ACGACTCCACCGCCTCCAGATGTGTGCAATCTTCCCAAATACGACGCCGTTGCATTCCTG
CGGAACGAACTTTATGTTTTCAGTTCAAAATATCTTTGGAGAAAGGGCCCAAAGGACAAA
AGCCCTCGTGGTCCTTTCCCGATCGTCAGTTTTTGGTCACGACTGAGTTCTGGTGTGGAT
GCTGCTTTTGAAAAACCCGCGACAGGGATCATCGTATTAATAAAAGGAAGTTACTATTAC
GAATTTAACGGAATGGAATTGGAACGCGGCTTTCCGAAGCATGTACGGAGTATGGGTATA
AACGGAGCCGATTTCGATGCCGCTATTTGGTGGGAAAGAAACGGGAGAATATATTTCTTC
AAAGACGATAAGTACTGGCGAATACACAAGTATGCTGCGGAGAAAGATTATCCTAAAGAT
ATAGGCGTGTGGACAGGTATTCCAAGTAGTCTAGATGCAGCCTTCACTGGAGTCGGAGAC
GACGGTCTCAACCACACGTATTTTGTGAAAGGCACACAATATTGGACGTTCCACAATCGC
AAAGTGGAAGCTGTTGGTGAACCTGGAAACTTTGCTGCTGACTGGCTAGGTTGTCCTGCC
ATCACTTCGTCGTTGCCTCGACCGCCAAACACTGGCGTTTCCGTCCCTGCCGTCGCCGCA
GTTTCAGTAGTGATAGTGATGTTACTCTTGGGACTTACATTTTATATCGTTTATCAAAAG
AAACAAGGGTTTAAATATCCACCTACGGAAGCGGGGGTTGTAGCGTCCCCTTACAGAGCG
GGATATAAAACTCACCACACAATGGAGGATAGCGATGTTCATGGGCGGCGTTTGTGGGTG
AAGACGTTTCATCACGGCTGGAACAATCTGAAATTTTCATTTCAGCAAAGGGTGTGA

InterProScan

PIRSF	Pept_M10A (IPR021190) - T[2-535] 2.5E-149
Gene3D	MetalloPept_cat_dom_sf (IPR024079) - T[4-267] 6.8E-86
PANTHER	MMP15 (IPR028729) - T[16-537] 7.4E-146
SUPERFAMILY	PGBD-like_sf (IPR036365) - T[20-81] 1.73E-13
Pfam	Peptidoglycan-bd-like (IPR002477) - T[21-72] 3.4E-7
PRINTS	Pept_M10A (IPR021190) - T[72-85] 6.6E-40 - T[127-142] 6.6E-40 - T[151-179] 6.6E-40 - T[212-237] 6.6E-40 - T[247-260] 6.6E-40
SMART	Peptidase_Metallo (IPR006026) - T[98-261] 1.2E-52
CDD	M10A_MMP (IPR033739) - T[101-260] 2.29511E-73
Pfam	Pept_M10_metallopeptidase (IPR001818) - T[101-260] 4.3E-56
Gene3D	Hemopexin-like_dom_sf (IPR036375) - T[321-518] 2.6E-55
SUPERFAMILY	Hemopexin-like_dom_sf (IPR036375) - T[322-518] 2.62E-51
CDD	Hemopexin-like_dom (IPR000585) - T[327-518] 8.13743E-48
ProSiteProfiles	Hemopexin-like_repeat (IPR018487) - T[331-375] 8.846 - T[376-414] 8.201 - T[422-468] 14.476 - T[472-518] 8.621
SMART	Hemopexin-like_repeat (IPR018487) - T[334-377] 0.34 - T[379-422] 0.0096 - T[425-469] 1.9E-10 - T[471-518] 0.017
Pfam	Hemopexin-like_repeat (IPR018487) - T[379-420] 2.2E-5 - T[425-469] 1.7E-12 - T[472-503] 1.5E-4