Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S5939.g11003.01.t

Possible name(s)

SLC10A2; SLC10A3; SLC10A5

Gene model

Haaura.CG.MTP2014.S5939.g11003

Location

S5939 [972 / 2,427]

Sequences

Amino acid sequence

Length: 485

>Haaura.CG.MTP2014.S5939.g11003.01.p
SISGSNMFHYNAIFLSVYLLNCCSKLTYGETNTQTDANIIINDVDLLVSENFPRVETFED
FTFNLTLNCSKYLAIIKQQFSNETFTKSLTFQLVLRINDSNIANFCDANGSASSYSITCR
DNTSKVVSLNAGHLGITGMSMEVLGEDNLRVKVHDVQIRVKREFTLFDELSFFILGPLIL
LNKCAFGAKIEISVMKNIFTQPVALTLCLLMQFVAMPLLAVLYSKLFLLSQDMALALFVG
AVCPGGGGGYVISYLVGGDVTLAISASLLSTVVAMGAMPGVVGLYTYIFQIPDTIAIPYI
KILIMLVAIAIPISTGMFINYKWPKFAKKFVRIIHPLSLFLIFCGFAFLAVSSNYIIHGP
VIGWALAVCLPMSGFILSILFARALGLSWPFSKAISLESGMKNTVLGIAVIELSYPQPEA
DLASILIIMVTLGHTTLAMLWYFVHLLRTRCCKTTEVRFSKLSSLDADGDEDSMETAQFL
TSKN*

Nucleotide sequence

Length: 1,455

>Haaura.CG.MTP2014.S5939.g11003.01.t
TCCATTTCAGGGTCCAATATGTTCCATTACAATGCAATATTCCTTTCTGTTTATTTATTG
AATTGTTGTTCAAAACTGACATATGGAGAAACCAATACCCAGACAGATGCAAACATCATC
ATAAACGATGTTGACCTCCTGGTCTCGGAAAATTTCCCAAGAGTTGAAACCTTCGAGGAC
TTTACTTTCAATCTGACATTAAATTGCAGTAAATATCTGGCAATAATCAAGCAGCAGTTT
TCAAACGAAACTTTCACAAAATCTTTGACTTTTCAATTGGTTCTTCGCATCAACGATTCT
AACATCGCTAATTTTTGCGATGCGAATGGATCAGCGAGTTCATATTCGATCACGTGTCGA
GACAACACATCGAAGGTCGTGTCCCTGAACGCTGGACATCTTGGTATAACTGGAATGTCG
ATGGAAGTTCTTGGAGAAGACAATTTACGTGTAAAAGTCCACGATGTGCAAATCCGAGTC
AAAAGAGAATTTACACTGTTTGATGAACTATCTTTTTTCATACTGGGTCCTCTCATTCTC
TTGAACAAATGTGCGTTCGGAGCCAAGATAGAAATTAGCGTGATGAAAAATATTTTTACT
CAGCCGGTGGCATTAACCCTTTGTTTACTGATGCAGTTTGTTGCGATGCCTTTACTTGCC
GTCCTTTATTCAAAACTGTTCCTTCTGTCCCAGGATATGGCTCTGGCATTGTTTGTCGGT
GCAGTGTGCCCTGGCGGTGGTGGCGGTTACGTCATAAGTTACTTGGTGGGCGGAGACGTC
ACGCTAGCCATATCCGCCAGCTTGCTTTCAACTGTGGTTGCAATGGGTGCTATGCCAGGG
GTGGTCGGTCTGTATACGTACATTTTTCAAATACCGGACACAATAGCGATACCATACATC
AAGATATTGATTATGCTTGTCGCGATCGCCATTCCGATTTCCACCGGAATGTTCATTAAT
TATAAATGGCCGAAATTCGCCAAGAAGTTTGTCAGAATCATTCATCCTCTGAGTCTGTTT
CTTATTTTCTGTGGTTTCGCGTTCCTCGCTGTATCTTCAAATTATATCATTCACGGTCCT
GTCATCGGCTGGGCTCTGGCGGTGTGTCTCCCCATGAGCGGTTTCATCCTGTCCATATTA
TTTGCGAGAGCCCTCGGTCTCAGTTGGCCCTTTTCCAAAGCTATTTCCTTGGAAAGTGGA
ATGAAGAACACGGTATTGGGCATAGCAGTTATCGAGCTGTCCTATCCCCAACCAGAAGCT
GACTTAGCATCCATTCTCATCATTATGGTCACTCTCGGACACACCACTCTTGCCATGCTC
TGGTATTTCGTACACCTGCTCAGAACCCGGTGCTGTAAAACTACTGAGGTCAGGTTTTCC
AAACTGTCTTCGCTGGACGCCGATGGCGACGAAGACTCGATGGAAACGGCTCAGTTTTTA
ACTTCAAAAAATTGA

InterProScan

PANTHER	SLC10A3 (IPR030210) - T[150-452] 4.5E-68
PANTHER	Bilac:Na_transpt (IPR004710) - T[150-452] 4.5E-68
Pfam	BilAc:Na_symport/Acr3 (IPR002657) - T[178-356] 1.0E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NTCP2_HUMAN	28.253 %	123	3.23E-31
P3_HUMAN	37.066 %	159	3.39E-43
NTCP5_HUMAN	31.135 %	146	5.41E-39