Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6035.g11024.03.t

Possible name(s)

RDH11; RDH13

Gene model

Haaura.CG.MTP2014.S6035.g11024

Location

S6035 [911 / 1,868]

Sequences

Amino acid sequence

Length: 279

>Haaura.CG.MTP2014.S6035.g11024.03.p
MAEKPVETVIRGWVNPEIKIPGKTVIITGANTGIGFATAVDLAKREARVIIACRNIEKGE
EAKKKIVEESKSENVVLKKLDLSSFESVREFAADINATESRLDVLINNAGVMMCPQSETK
DGFELQFGTNHLGHFLLTNLLLDLMKRSAPSRIMTVSCKLCNVLFSRELSKKLQGTGVTS
NSLEPGAVKTDLQRHVGTHSWPTFRDYLANIGNFLTRWFYGTPEKGAQTLIYLAVAQELV
EASGNFYSNCTQTEESYDAKNDDFAKRLWKMSEEFVGM*

Nucleotide sequence

Length: 864

>Haaura.CG.MTP2014.S6035.g11024.03.t
ATGGCTGAAAAACCTGTGGAAACTGTCATCAGAGGTTGGGTGAATCCAGAGATCAAAATT
CCTGGTAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTTGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCAAGAGTTATTATCGCTTGCAGGAATATAGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTT
GATCTCTCGTCGTTTGAATCTGTTCGAGAATTTGCCGCTGACATCAATGCTACTGAATCT
CGACTTGACGTTCTTATTAATAACGCCGGGGTGATGATGTGCCCGCAGTCTGAGACCAAG
GATGGGTTCGAGCTGCAGTTTGGGACGAATCATCTGGGGCATTTCCTTTTAACGAATCTG
TTGTTGGATCTGATGAAGAGAAGTGCTCCAAGCAGGATCATGACCGTATCATGCAAGCTA
TGTAATGTGCTTTTCTCTAGAGAGCTAAGCAAGAAATTGCAAGGCACTGGTGTTACATCA
AATAGTTTAGAACCTGGAGCTGTTAAGACGGATTTACAGAGGCATGTTGGAACACACAGT
TGGCCAACATTCAGGGATTATCTCGCAAACATTGGAAATTTCTTAACAAGATGGTTTTAT
GGGACCCCAGAAAAGGGAGCTCAAACCTTGATTTACTTGGCAGTTGCCCAGGAGCTTGTT
GAAGCCAGTGGGAATTTCTACTCAAACTGCACACAGACGGAAGAGTCGTACGATGCGAAA
AATGATGATTTTGCCAAGAGATTGTGGAAAATGAGTGAAGAATTTGTCGGAATGTAGAAG
AAAAGTGAGGAAGGAGGAGCAGAA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[18-277] 1.84E-51
Pfam	SDR_fam (IPR002347) - T[23-161] 1.6E-25
PRINTS	SDR_fam (IPR002347) - T[24-41] 3.5E-16 - T[100-111] 3.5E-16 - T[176-193] 3.5E-16 - T[216-236] 3.5E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	43.051 %	226	5.03E-73
RDH13_HUMAN	46.875 %	234	2.84E-76
RDH12_HUMAN	44.108 %	222	1.24E-71