- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S6035.g11024.04.t
Possible name(s)
RDH11; RDH13
Gene model
Location
S6035 [923 / 1,868]
Amino acid sequence
Length: 310
>Haaura.CG.MTP2014.S6035.g11024.04.p
MAEKPVETVIRGWVNPEIKIPGKTVIITGANTGIGFATAVDLAKREARVIIACRNIEKGE
EAKKKIVEESKSENVVLKKLDLSSFESVREFAADINATESRLDVLINNAGVMMCPQSETK
DGFELQFGTNHLGHFLLTNLLLDLMKRSAPSRIMTVSSMTHHRWFGTSMQWDDLNLRNNY
DSTRAYGQSKLCNVLFSRELSKKLQGTGVTSNSLEPGAVKTDLQRHVGTHSWPTFRDYLA
NIGNFLTRWFYGTPEKGAQTLIYLAVAQELVEASGNFYSNCTQTEESYDAKNDDFAKRLW
KMSEEFVGM*
Nucleotide sequence
Length: 945
>Haaura.CG.MTP2014.S6035.g11024.04.t
ATGGCTGAAAAACCTGTGGAAACTGTCATCAGAGGTTGGGTGAATCCAGAGATCAAAATT
CCTGGTAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTTGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCAAGAGTTATTATCGCTTGCAGGAATATAGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTT
GATCTCTCGTCGTTTGAATCTGTTCGAGAATTTGCCGCTGACATCAATGCTACTGAATCT
CGACTTGACGTTCTTATTAATAACGCCGGGGTGATGATGTGCCCGCAGTCTGAGACCAAG
GATGGGTTCGAGCTGCAGTTTGGGACGAATCATCTGGGGCATTTCCTTTTAACGAATCTG
TTGTTGGATCTGATGAAGAGAAGTGCTCCAAGCAGGATCATGACCGTATCATCTATGACT
CATCACAGATGGTTCGGAACATCAATGCAATGGGACGATTTGAATTTAAGGAACAATTAT
GATTCAACTCGAGCTTATGGCCAAAGCAAGCTATGTAATGTGCTTTTCTCTAGAGAGCTA
AGCAAGAAATTGCAAGGCACTGGTGTTACATCAAATAGTTTAGAACCTGGAGCTGTTAAG
ACGGATTTACAGAGGCATGTTGGAACACACAGTTGGCCAACATTCAGGGATTATCTCGCA
AACATTGGAAATTTCTTAACAAGATGGTTTTATGGGACCCCAGAAAAGGGAGCTCAAACC
TTGATTTACTTGGCAGTTGCCCAGGAGCTTGTTGAAGCCAGTGGGAATTTCTACTCAAAC
TGCACACAGACGGAAGAGTCGTACGATGCGAAAAATGATGATTTTGCCAAGAGATTGTGG
AAAATGAGTGAAGAATTTGTCGGAATGTAGAAGAAAAGTGAGGAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[21-282] 9.74E-58 |
| Pfam |
SDR_fam (IPR002347) - T[23-160] 8.2E-27 |
| PRINTS |
SDR_fam (IPR002347) - T[24-41] 6.7E-20 - T[100-111] 6.7E-20 - T[100-111] 2.8E-5 - T[145-161] 6.7E-20 - T[151-159] 2.8E-5 - T[186-205] 6.7E-20 - T[186-205] 2.8E-5 - T[207-224] 6.7E-20 - T[247-267] 6.7E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 45.302 % | 250 | 4.36E-82 |
| RDH13_HUMAN | 49.007 % | 265 | 1.83E-87 |
| RDH12_HUMAN | 47 % | 249 | 1.21E-81 |