- Transcript 'Haaura.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S611.g05953.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S611 [44,436 / 45,663]
Amino acid sequence
Length: 341
>Haaura.CG.MTP2014.S611.g05953.01.p
MSDGEEDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS
Nucleotide sequence
Length: 1,023
>Haaura.CG.MTP2014.S611.g05953.01.t
ATGTCTGATGGTGAAGAAGATACAACTGCAATCGTCTGCGACAATGGATCAGGATTGGTT
AAATCTGGTTTTGCCGGTGATGATGCTCCAAGAGCAGTATTCCCTTCTATTGTAGGACGA
CCAAGACATCAAGGTGTTATGGTAGGAATGGGACAGAAAGACAGTTATGTTGGAGATGAA
GCACAAAGTAAAAGAGGAATTCTCACTCTCAAATATCCAATTGAACATGGAATCATCACC
AATTGGGATGATATGGAGAAAATATGGCATCATACCTTCTACAATGAGCTCCGTGTTGCT
CCTGAAGAACATCCAACTCTTCTCACAGAAGCTCCGTTGAATCCTAAAGCTAACAGAGAA
AAGATGACACAAATTATGTTTGAAACTTTCAATGTGCCTGCTATGTATGTTGCCATCCAG
GCTGTACTTTCTCTCTATGCCTCTGGAAGAACAACTGGTATTGTTCTTGATTCTGGTGAT
GGTGTTTCCCATAACGTACCAATCTATGAAGGATATGCTCTCCCTCATGCTATTGCACGA
TTGGATTTAGCTGGCCGTGATCTTACTGATTACCTAATGAAGATCCTCACAGAAAGAGGA
TACTCATTTGTTACGACTGCTGAACGAGAAATAGTTCGTGATATCAAAGAGAAACTGTGC
TATGTTGCTCTTGATTTCGAACAAGAAATGGCAACGGCAGCTTCCTCTACATCTCTGGAA
AAAAGTTATGAGCTTCCCGACGGTCAAGTCATCACTATCGGAAATGAGAGATTCCGTTGT
CCTGAAACCCTCTTCCAACCATCCTTCATTGGTATGGAATCTGCCGGTATTCATGAAACA
ACATATAACTCTATCATGAAATGCGATATTGACATTCGAAAAGATCTTTATGCAAACAAC
GTACTTTCCGGAGGAACCACCATGTATCCTGGTATTGCTGATCGTATGCAAAAAGAAATC
ACTGCTCTTGCCCCAAGTACCATGAAGATCAAAATCATTGCTCCTCCCGAACGTAAATAC
TCT
| PANTHER |
Actin (IPR004000) - T[5-341] 1.0E-239 |
| Pfam |
Actin (IPR004000) - T[6-341] 6.1E-123 |
| SMART |
Actin (IPR004000) - T[8-341] 2.7E-186 |
| PRINTS |
Actin (IPR004000) - T[29-38] 3.7E-58 - T[52-63] 3.7E-58 - T[64-86] 3.7E-58 - T[118-131] 3.7E-58 - T[143-162] 3.7E-58 - T[239-255] 3.7E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.329 % | 689 | 0 |
| ACTS_HUMAN | 97.329 % | 689 | 0 |
| ACTC_HUMAN | 97.626 % | 690 | 0 |