Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S616.g05972.01.t

Possible name(s)

CCDC12

Gene model

Haaura.CG.MTP2014.S616.g05972

Location

S616 [9,131 / 9,614]

Sequences

Amino acid sequence

Length: 161

>Haaura.CG.MTP2014.S616.g05972.01.p
MGDRNIGSMEDEARKRRERLMMMRKKRAAESESTPGNAKQSKDDDKTELKLRNYTPVNDG
LSANELDKPQPVHVEDQLQEQLKSAKPELTIKDEVDLLNLAPRKPDWDLKRDIKGKLDKL
EKRTQRAIAELIRERLKQSNDVNNLSEVAIMPQPQAEDSE*

Nucleotide sequence

Length: 483

>Haaura.CG.MTP2014.S616.g05972.01.t
ATGGGCGACAGAAACATAGGTTCCATGGAAGACGAAGCGAGAAAGAGGAGGGAAAGACTC
ATGATGATGAGAAAGAAGAGGGCAGCAGAATCGGAATCTACGCCAGGAAATGCCAAGCAG
AGCAAGGATGACGATAAAACTGAACTTAAACTAAGAAATTACACACCGGTAAATGACGGA
CTGTCCGCCAATGAACTCGATAAACCGCAACCAGTTCATGTTGAAGACCAGTTGCAGGAA
CAACTAAAATCGGCCAAGCCAGAACTCACCATCAAAGACGAAGTCGACCTGTTAAACCTG
GCTCCGAGAAAGCCGGATTGGGATTTGAAAAGAGACATCAAGGGTAAACTCGACAAGCTA
GAAAAAAGAACTCAAAGGGCCATCGCGGAACTTATCCGAGAGAGACTTAAGCAGTCGAAC
GACGTAAACAATTTGTCCGAAGTCGCTATAATGCCGCAGCCCCAAGCGGAGGATTCAGAA
TGA

InterProScan

PANTHER	mRNA_splic_Cwf18 (IPR013169) - T[4-150] 3.9E-43
Pfam	mRNA_splic_Cwf18 (IPR013169) - T[8-136] 5.0E-36

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CCD12_HUMAN	48.951 %	122	4.39E-36